Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 2.4e-231 805.1 387 100.0
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 7.6e-201 703.7 428 82.2
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 6.2e-195 684.1 387 86.0
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 3.5e-190 668.3 387 82.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.3e-189 665.6 387 82.2
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.9e-189 664.8 387 81.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.7e-189 664.1 387 82.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.7e-189 664.1 387 82.7
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.1e-187 659.1 387 81.9
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.1e-187 659.1 387 81.4
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 2.1e-187 659.1 387 82.4
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.8e-187 658.7 387 81.4
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 2.8e-187 658.7 387 81.4
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 4.8e-187 657.9 387 81.9
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 8.2e-187 657.1 387 81.4
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.1e-186 656.8 387 81.4
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.8e-186 656.0 387 82.4
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.2e-185 653.3 387 81.1
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.5e-185 652.9 387 81.1
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.5e-185 652.9 387 80.1
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.0e-185 652.5 385 81.3
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.0e-185 652.5 387 80.9
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.6e-185 652.1 385 81.0
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.6e-185 652.1 387 79.8
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 3.4e-185 651.7 387 81.1
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 4.5e-185 651.4 387 80.9
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 5.8e-185 651.0 384 81.0
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.8e-185 651.0 387 79.8
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.0e-184 650.2 387 80.4
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-184 649.8 384 80.7
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.9e-184 648.7 387 79.3
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 3.8e-184 648.3 387 80.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 8.4e-184 647.1 385 80.0
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.4e-183 646.4 387 79.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.4e-183 646.4 387 79.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.5e-183 645.6 383 80.7
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 2.5e-183 645.6 387 79.8
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 9.3e-183 643.7 387 79.1
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.2e-182 643.3 387 78.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-182 642.5 387 80.6
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 4.6e-182 641.3 384 79.7
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.0e-181 640.2 387 79.1
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.0e-181 640.2 387 79.3
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.0e-181 640.2 389 78.9
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.3e-181 639.8 422 74.6
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 6.7e-181 637.5 386 80.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 8.7e-181 637.1 387 78.6
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-180 636.7 382 80.9
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.1e-180 636.7 385 79.5
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.3e-180 635.2 387 78.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 4.3e-180 634.8 382 80.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.3e-180 634.8 382 80.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 5.7e-180 634.4 387 78.0
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.4e-180 634.0 382 80.4
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 7.4e-180 634.0 387 77.8
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.3e-179 633.3 383 79.1
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.2e-179 632.5 384 78.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.8e-179 632.1 382 80.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.4e-178 629.0 387 78.6
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 2.4e-178 629.0 385 78.2
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 2.4e-178 629.0 388 78.1
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.0e-176 623.6 385 76.9
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 5.0e-176 621.3 386 77.7
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 8.5e-176 620.5 385 76.1
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.5e-175 619.0 385 76.1
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 4.2e-175 618.2 387 76.7
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.5e-175 617.8 386 77.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 7.2e-175 617.5 385 75.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-174 615.9 385 76.1
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-174 615.9 385 76.1
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.1e-174 615.9 385 76.1
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.7e-174 615.5 385 75.8
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 4.6e-174 614.8 385 75.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 4.6e-174 614.8 385 75.8
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 8.8e-173 610.5 366 79.8
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.1e-172 610.1 383 76.5
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.1e-172 610.1 443 69.1
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 7.4e-172 607.4 385 75.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.4e-172 607.4 427 70.5
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.2e-171 605.9 387 75.2
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 8.2e-171 604.0 383 76.0
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 2.4e-170 602.4 383 74.7
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.0e-169 599.4 385 74.3
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.4e-169 598.6 386 75.6
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 7.7e-169 597.4 381 74.8
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 7.7e-169 597.4 385 74.0
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 1.7e-168 596.3 384 74.0
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.2e-168 595.9 383 74.4
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 6.5e-168 594.3 383 74.2
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.5e-167 592.4 413 69.5
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 3.3e-164 582.0 385 73.5
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 4.8e-163 578.2 392 69.1
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.8e-163 578.2 383 71.3
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 9.1e-162 573.9 392 68.9
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 8.5e-160 567.4 340 81.5
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 4.4e-156 555.1 387 70.3
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 3.7e-155 552.0 362 73.2
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.1e-154 550.4 309 84.1
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 6.5e-152 541.2 302 85.1
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 6.7e-149 531.2 340 77.1
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.0e-145 519.6 383 66.1
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.7e-142 509.2 384 63.5
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 3.6e-142 508.8 384 66.7
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 8.0e-142 507.7 362 70.4
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.7e-139 500.0 384 64.8
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 3.1e-138 495.7 279 88.9
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 5.4e-138 495.0 383 62.4
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 1.1e-127 460.7 394 58.6
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 9.5e-127 457.6 387 62.3
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 4.4e-124 448.7 267 82.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.0e-122 441.4 391 59.8
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.2e-108 397.5 265 73.6
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.5e-108 397.1 211 87.2
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.7e-99 367.1 231 77.5
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.5e-71 274.2 190 73.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.6e-65 254.2 152 74.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.5e-60 237.7 154 70.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.1e-57 225.7 119 84.0
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 9.7e-55 218.4 126 77.8
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 5.5e-50 202.6 326 38.3
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.3e-46 191.4 233 47.6
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 6.7e-40 169.1 98 84.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 5.9e-36 156.0 117 68.4
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.5e-26 124.8 59 93.2
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 2.2e-22 110.9 137 47.4
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 5.9e-20 102.8 79 67.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.2e-15 88.6 51 72.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.6e-15 87.4 39 92.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 2.2e-14 84.3 131 43.5
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 3.7e-06 57.0 231 26.0


User provided reference genes

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