Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 1.1e-56 223.4 136 100.0
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 3.8e-54 214.9 136 94.9
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 6.4e-54 214.2 138 94.2
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 7.6e-39 164.1 137 67.2
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 3.5e-28 128.6 145 56.6
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 5.7e-26 121.3 149 49.7
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 7.4e-26 120.9 141 49.6
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 7.4e-26 120.9 144 45.8
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 1.6e-25 119.8 138 51.4
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 2.2e-25 119.4 140 49.3
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 2.8e-25 119.0 146 45.2
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 6.3e-25 117.9 140 49.3
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.4e-24 116.7 144 49.3
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 1.4e-24 116.7 144 49.3
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.8e-24 116.3 148 45.9
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 1.8e-24 116.3 148 45.9
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 4.1e-24 115.2 145 47.6
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 5.3e-24 114.8 136 49.3
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.2e-23 113.6 148 45.3
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 2.0e-23 112.8 144 46.5
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 2.0e-23 112.8 137 48.9
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.6e-23 112.5 134 57.5
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 3.4e-23 112.1 130 46.9
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 4.5e-23 111.7 144 47.9
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 5.9e-23 111.3 135 49.6
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 5.9e-23 111.3 145 55.9
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 1.0e-22 110.5 144 47.9
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.0e-22 110.5 134 48.5
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 1.3e-22 110.2 132 50.8
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 1.7e-22 109.8 149 45.6
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 1.7e-22 109.8 131 51.1
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 2.2e-22 109.4 140 46.4
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 2.2e-22 109.4 145 47.6
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.8e-22 108.6 132 55.3
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 5.0e-22 108.2 134 43.3
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 5.0e-22 108.2 134 43.3
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 1.1e-21 107.1 135 48.1
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 2.5e-21 105.9 148 52.0
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 3.2e-21 105.5 136 44.9
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 5.5e-21 104.8 130 46.9
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 7.2e-21 104.4 143 46.9
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 7.2e-21 104.4 140 42.9
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 7.2e-21 104.4 131 43.5
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 9.4e-21 104.0 142 44.4
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 2.7e-20 102.4 134 44.8
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 3.6e-20 102.1 137 46.0
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.0e-19 100.5 141 46.1
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 1.0e-19 100.5 140 45.0
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 1.8e-19 99.8 153 43.1
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 1.8e-19 99.8 135 41.5
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 1.8e-19 99.8 132 43.2
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 1.8e-19 99.8 132 48.5
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 2.3e-19 99.4 131 57.3
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 2.3e-19 99.4 133 48.9
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 3.9e-19 98.6 142 44.4
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 3.9e-19 98.6 134 42.5
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 6.7e-19 97.8 154 41.6
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 6.7e-19 97.8 141 44.7
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 6.7e-19 97.8 141 44.7
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 6.7e-19 97.8 88 58.0
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 8.8e-19 97.4 141 43.3
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 8.8e-19 97.4 141 43.3
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.1e-18 97.1 131 48.1
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.5e-18 96.7 146 44.5
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 1.5e-18 96.7 131 58.8
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 1.5e-18 96.7 137 43.1
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 4.3e-18 95.1 134 39.6
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 7.4e-18 94.4 137 42.3
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 9.7e-18 94.0 139 43.2
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 1.7e-17 93.2 143 39.9
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.7e-17 93.2 141 43.3
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 6.3e-17 91.3 130 43.1
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 6.3e-17 91.3 130 43.1
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 8.2e-17 90.9 135 44.4
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 8.2e-17 90.9 129 45.0
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 3.1e-16 89.0 140 39.3
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 3.1e-16 89.0 134 50.7
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 5.3e-16 88.2 119 44.5
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 9.1e-16 87.4 137 49.6
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 1.2e-15 87.0 134 42.5
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 3.4e-15 85.5 135 40.0
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 3.4e-15 85.5 135 40.0
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 3.4e-15 85.5 135 40.0
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 4.5e-15 85.1 135 39.3
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 7.7e-15 84.3 132 38.6
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 1.0e-14 84.0 137 39.4
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 1.7e-14 83.2 136 40.4
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 1.7e-14 83.2 136 40.4
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 2.2e-14 82.8 139 36.7
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 2.2e-14 82.8 75 65.3
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 3.8e-14 82.0 131 38.2
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 5.0e-14 81.6 136 39.7
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 5.0e-14 81.6 155 38.1
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 6.5e-14 81.3 140 37.1
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 6.5e-14 81.3 131 39.7
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 6.5e-14 81.3 147 52.4
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 3.2e-13 79.0 136 45.6
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 9.4e-13 77.4 87 49.4
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 4.7e-12 75.1 62 58.1
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 7.9e-12 74.3 144 43.1
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 5.1e-11 71.6 153 37.9
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 3.7e-09 65.5 107 46.7
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 1.5e-07 60.1 130 32.3
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 2.6e-07 59.3 131 35.1
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 3.8e-06 55.5 151 28.5
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 6.5e-06 54.7 96 36.5
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 8.5e-06 54.3 139 30.2


User provided reference genes

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