Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009616.2 Cucumis melo HOM05D003648 ORTHO05D004267 6.1e-150 534.3 295 100.0
CsaV3_3G038720 Cucumis sativus L. HOM05D003648 ORTHO05D004267 5.9e-121 438.0 302 80.8
Sed0001893 Sechium edule HOM05D003648 ORTHO05D004267 2.3e-64 250.0 314 54.8
ClCG10G017600 Citrullus lanatus HOM05D003648 ORTHO05D004267 1.3e-48 197.6 291 47.1
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 7.7e-44 181.8 205 54.6
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 1.0e-43 181.4 247 49.0
Manes.09G036200 Manihot esculenta HOM05D003648 ORTHO05D004267 4.6e-41 172.6 205 51.2
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 1.0e-40 171.4 266 42.9
QL07p024078 Quercus lobata HOM05D003648 ORTHO05D004267 2.3e-40 170.2 261 44.8
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 1.1e-39 167.9 211 50.2
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 1.1e-39 167.9 267 44.9
VMungo0720G1699 Vigna mungo HOM05D003648 ORTHO05D004267 1.5e-39 167.5 220 48.2
Haze_20003 Corylus avellana HOM05D003648 ORTHO05D004267 2.0e-39 167.2 264 45.8
CiPaw.10G026000 Carya illinoinensis HOM05D003648 ORTHO05D004267 2.5e-39 166.8 244 46.3
Cfa020157 Carpinus fangiana HOM05D003648 ORTHO05D004267 3.3e-39 166.4 245 45.7
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.3e-39 166.4 324 40.1
Prupe.7G079000 Prunus persica HOM05D003648 ORTHO05D004267 3.3e-39 166.4 282 42.9
Potri.006G193500 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.3e-38 164.5 363 37.7
Cpa.g.sc85.54 Carica papaya HOM05D003648 ORTHO05D004267 1.7e-38 164.1 258 45.0
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 2.2e-38 163.7 205 48.8
Potri.016G058100 Populus trichocarpa HOM05D003648 ORTHO05D004267 3.7e-38 162.9 212 50.0
Atru.chr8.1128 Acer truncatum HOM05D003648 ORTHO05D004267 1.4e-37 161.0 245 44.9
Potri.006G193300 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.8e-37 160.6 208 48.1
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.4e-37 160.2 227 47.6
Phvul.007G260600 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 2.4e-37 160.2 207 46.9
Sabra16G0061400 Salix brachista HOM05D003648 ORTHO05D004267 2.4e-37 160.2 357 39.2
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 3.1e-37 159.8 264 43.6
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 3.1e-37 159.8 263 43.0
Haze_20001 Corylus avellana HOM05D003648 ORTHO05D004267 4.1e-37 159.5 220 48.2
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.6e-36 156.8 231 45.0
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.6e-36 156.8 227 47.1
Glyma.03G145500 Glycine max HOM05D003648 ORTHO05D004267 3.4e-36 156.4 224 47.3
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 3.4e-36 156.4 190 51.6
TPR.G18228 Trifolium pratense HOM05D003648 ORTHO05D004267 4.5e-36 156.0 209 50.7
MD14G1055800 Malus domestica HOM05D003648 ORTHO05D004267 5.9e-36 155.6 235 46.4
Manes.08G043600 Manihot esculenta HOM05D003648 ORTHO05D004267 7.7e-36 155.2 258 42.2
Glyma.09G110100 Glycine max HOM05D003648 ORTHO05D004267 1.0e-35 154.8 224 45.5
TWI77G0250 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 1.0e-35 154.8 225 48.4
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 1.7e-35 154.1 233 44.6
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.7e-35 154.1 319 38.2
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 1.7e-35 154.1 319 38.2
Lalb_Chr18g0047911 Lupinus albus HOM05D003648 ORTHO05D004267 1.7e-35 154.1 266 40.6
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 2.2e-35 153.7 195 49.2
TPR.G15988 Trifolium pratense HOM05D003648 ORTHO05D004267 2.2e-35 153.7 195 52.8
Glyma.19G148700 Glycine max HOM05D003648 ORTHO05D004267 3.8e-35 152.9 225 46.2
Lalb_Chr18g0047921 Lupinus albus HOM05D003648 ORTHO05D004267 6.5e-35 152.1 275 40.7
Sabra06G0148400 Salix brachista HOM05D003648 ORTHO05D004267 8.5e-35 151.8 219 47.0
Nn2g15698 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-34 151.4 210 48.6
Duzib128G0816 Durio zibethinus HOM05D003648 ORTHO05D004267 3.2e-34 149.8 242 43.8
Glyma.02G171900 Glycine max HOM05D003648 ORTHO05D004267 3.2e-34 149.8 213 46.5
Peaxi162Scf00480g00036 Petunia axillaris HOM05D003648 ORTHO05D004267 7.2e-34 148.7 222 45.5
Phvul.001G143000 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 9.4e-34 148.3 198 47.0
TWI53G1880 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 2.7e-33 146.7 215 46.0
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 3.6e-33 146.4 200 49.0
MD12G1056100 Malus domestica HOM05D003648 ORTHO05D004267 6.1e-33 145.6 253 41.9
VMungo1383G3335 Vigna mungo HOM05D003648 ORTHO05D004267 1.4e-32 144.4 206 46.1
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla HOM05D003648 ORTHO05D004267 2.3e-32 143.7 244 38.5
Sabra06G0148600 Salix brachista HOM05D003648 ORTHO05D004267 3.9e-32 142.9 329 38.0
Medtr7g093350 Medicago truncatula HOM05D003648 ORTHO05D004267 2.6e-31 140.2 199 46.2
Potri.016G058000 Populus trichocarpa HOM05D003648 ORTHO05D004267 3.3e-31 139.8 345 36.5
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 4.4e-31 139.4 306 35.6
Nn7g35986 Nelumbo nucifera HOM05D003648 ORTHO05D004267 5.7e-31 139.0 248 42.3
Nitab4.5_0006890g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 5.7e-31 139.0 197 46.7
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea HOM05D003648 ORTHO05D004267 2.2e-30 137.1 195 46.7
Lj5g0018704 Lotus japonicus HOM05D003648 ORTHO05D004267 2.8e-30 136.7 246 41.5
CSS0001516 Camellia sinensis var. sinensis HOM05D003648 ORTHO05D004267 6.3e-30 135.6 224 42.0
Nitab4.5_0003600g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 6.3e-30 135.6 198 46.0
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 8.2e-30 135.2 128 55.5
Gohir.1Z049549 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.1e-29 134.8 188 49.5
Nn7g35998 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-29 134.8 275 38.2
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea HOM05D003648 ORTHO05D004267 1.8e-29 134.0 191 46.6
Dinv14314 Davidia involucrata HOM05D003648 ORTHO05D004267 3.1e-29 133.3 135 54.8
MSTRG.19911 Avicennia marina HOM05D003648 ORTHO05D004267 4.1e-29 132.9 220 42.7
Actinidia22042 Actinidia chinensis HOM05D003648 ORTHO05D004267 5.3e-29 132.5 205 44.9
Ciclev10012160m.g Citrus clementina HOM05D003648 ORTHO05D004267 7.0e-29 132.1 339 36.9
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 1.5e-28 131.0 295 36.6
Cc06_g15770 Coffea canephora HOM05D003648 ORTHO05D004267 2.0e-28 130.6 162 51.2
Eucgr.A02456 Eucalyptus grandis HOM05D003648 ORTHO05D004267 5.9e-28 129.0 213 41.3
Gohir.A04G053800 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.3e-27 127.9 227 44.1
COL.COLO4_29331 Corchorus olitorius HOM05D003648 ORTHO05D004267 2.2e-27 127.1 387 32.8
Oeu007752.1 Olea europaea HOM05D003648 ORTHO05D004267 5.0e-27 125.9 186 44.1
Lsat_1_v5_gn_9_26100 Lactuca sativa HOM05D003648 ORTHO05D004267 8.5e-27 125.2 200 46.0
TAR633G0715 Trochodendron aralioides HOM05D003648 ORTHO05D004267 8.5e-27 125.2 199 43.7
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 1.9e-26 124.0 190 41.6
Gohir.D04G089900 Gossypium hirsutum HOM05D003648 ORTHO05D004267 2.5e-26 123.6 227 42.3
Psat0s5171g0040 Pisum sativum HOM05D003648 ORTHO05D004267 4.2e-26 122.9 120 54.2
DCAR_013539 Daucus carota HOM05D003648 ORTHO05D004267 5.5e-26 122.5 245 38.4
GSVIVG01033479001 Vitis vinifera HOM05D003648 ORTHO05D004267 5.5e-26 122.5 194 44.3
Gorai.012G100300 Gossypium raimondii HOM05D003648 ORTHO05D004267 7.2e-26 122.1 226 42.0
EL10Ac3g06898 Beta vulgaris HOM05D003648 ORTHO05D004267 1.6e-25 120.9 219 42.5
PGSC0003DMG400023669 Solanum tuberosum HOM05D003648 ORTHO05D004267 4.7e-25 119.4 213 41.3
MSTRG.6486 Avicennia marina HOM05D003648 ORTHO05D004267 6.1e-25 119.0 183 46.4
CAN.G128.46 Capsicum annuum HOM05D003648 ORTHO05D004267 8.0e-25 118.6 266 38.0
THA.LOC104802623 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 1.8e-24 117.5 180 45.6
C03p28080 Brassica napus HOM05D003648 ORTHO05D004267 3.0e-24 116.7 115 58.3
Nn2g15714 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.9e-24 116.3 252 36.5
BcaC01g05312 Brassica carinata HOM05D003648 ORTHO05D004267 5.2e-24 115.9 115 58.3
A03p23540 Brassica napus HOM05D003648 ORTHO05D004267 5.2e-24 115.9 115 58.3
BraA03t11571Z Brassica rapa HOM05D003648 ORTHO05D004267 5.2e-24 115.9 115 58.3
BolC3t15177H Brassica oleracea HOM05D003648 ORTHO05D004267 6.7e-24 115.5 115 58.3
GSVIVG01033486001 Vitis vinifera HOM05D003648 ORTHO05D004267 6.7e-24 115.5 110 57.3
AL4G40410 Arabidopsis lyrata HOM05D003648 ORTHO05D004267 1.1e-23 114.8 114 58.8
AT2G42040 Arabidopsis thaliana HOM05D003648 ORTHO05D004267 1.1e-23 114.8 116 56.9
Actinidia32398 Actinidia chinensis HOM05D003648 ORTHO05D004267 2.6e-23 113.6 201 41.8
Actinidia22043 Actinidia chinensis HOM05D003648 ORTHO05D004267 3.3e-23 113.2 141 49.6
DCAR_017003 Daucus carota HOM05D003648 ORTHO05D004267 3.3e-23 113.2 188 41.0
PGR004G0238 Punica granatum HOM05D003648 ORTHO05D004267 3.3e-23 113.2 131 52.7
CARHR137130 Cardamine hirsuta HOM05D003648 ORTHO05D004267 5.7e-23 112.5 113 57.5
Rhsim03G0005500 Rhododendron simsii HOM05D003648 ORTHO05D004267 5.7e-23 112.5 213 39.4
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 5.7e-23 112.5 137 49.6
SpUn1032_0010 Schrenkiella parvula HOM05D003648 ORTHO05D004267 7.4e-23 112.1 109 56.0
Solyc10g080530.2 Solanum lycopersicum HOM05D003648 ORTHO05D004267 1.3e-22 111.3 212 40.1
vmacro07898 Vaccinium macrocarpon HOM05D003648 ORTHO05D004267 1.7e-22 110.9 116 56.0
Dinv24064 Davidia involucrata HOM05D003648 ORTHO05D004267 2.2e-22 110.5 220 38.6
Hund19206 Selenicereus undatus HOM05D003648 ORTHO05D004267 2.2e-22 110.5 187 42.8
Oeu039811.1 Olea europaea HOM05D003648 ORTHO05D004267 4.8e-22 109.4 140 47.9
Thhalv10017052m.g Eutrema salsugineum HOM05D003648 ORTHO05D004267 6.3e-22 109.0 113 55.8
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 1.1e-21 108.2 154 44.2
BcaB01g03435 Brassica carinata HOM05D003648 ORTHO05D004267 1.4e-21 107.8 158 44.9
A05p02700 Brassica napus HOM05D003648 ORTHO05D004267 1.4e-21 107.8 125 51.2
Migut.J01846 Erythranthe guttata HOM05D003648 ORTHO05D004267 1.4e-21 107.8 148 47.3
BraA05t19262Z Brassica rapa HOM05D003648 ORTHO05D004267 3.1e-21 106.7 125 50.4
CAN.G128.47 Capsicum annuum HOM05D003648 ORTHO05D004267 5.3e-21 105.9 124 49.2
CANSAT64G1307 Cannabis sativa HOM05D003648 ORTHO05D004267 7.0e-21 105.5 263 34.2
HanXRQChr10g0289891 Helianthus annuus HOM05D003648 ORTHO05D004267 7.0e-21 105.5 208 40.4
Aa31LG1G24140 Aethionema arabicum HOM05D003648 ORTHO05D004267 9.1e-21 105.1 116 52.6
BcaC02g12455 Brassica carinata HOM05D003648 ORTHO05D004267 1.6e-20 104.4 125 49.6
C04p03220 Brassica napus HOM05D003648 ORTHO05D004267 1.6e-20 104.4 125 49.6
BolC4t21960H Brassica oleracea HOM05D003648 ORTHO05D004267 1.6e-20 104.4 125 49.6
C04p69480 Brassica napus HOM05D003648 ORTHO05D004267 3.5e-20 103.2 105 53.3
BolC4t28447H Brassica oleracea HOM05D003648 ORTHO05D004267 3.5e-20 103.2 105 53.3
Carub.0004s2437 Capsella rubella HOM05D003648 ORTHO05D004267 3.5e-20 103.2 107 56.1
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 1.7e-19 100.9 189 42.9
CDE05G0371 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 2.2e-19 100.5 181 39.2
Ah.13g075770 Amaranthus hybridus HOM05D003648 ORTHO05D004267 2.9e-19 100.1 120 49.2
MBI13_g32435_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 2.9e-19 100.1 127 48.0
MBI19_g23209_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 2.9e-19 100.1 139 41.0
MBI19_g43859_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 2.9e-19 100.1 51 86.3
BcaB06g29223 Brassica carinata HOM05D003648 ORTHO05D004267 1.5e-18 97.8 128 46.1
Ah.04g152510 Amaranthus hybridus HOM05D003648 ORTHO05D004267 3.2e-18 96.7 189 38.6
HPP92_016181 Vanilla planifolia HOM05D003648 ORTHO05D004267 3.2e-18 96.7 150 42.0
Aqoxy2G00100 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 4.2e-18 96.3 157 40.1
HPP92_026735 Vanilla planifolia HOM05D003648 ORTHO05D004267 4.2e-18 96.3 150 42.0
BcaC02g07267 Brassica carinata HOM05D003648 ORTHO05D004267 7.2e-18 95.5 105 52.4
SalBow6G7267 Salvia bowleyana HOM05D003648 ORTHO05D004267 1.6e-17 94.4 138 45.7
CDE04G2150 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 4.7e-17 92.8 182 40.1
CDE06G0452 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 4.7e-17 92.8 183 39.3
AUR62015354 Chenopodium quinoa HOM05D003648 ORTHO05D004267 6.1e-17 92.4 117 47.9
BraA04t18655Z Brassica rapa HOM05D003648 ORTHO05D004267 2.3e-16 90.5 105 50.5
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 5.2e-16 89.4 186 32.8
A04p31970 Brassica napus HOM05D003648 ORTHO05D004267 1.2e-15 88.2 105 49.5
Nn7g36026 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.5e-15 87.8 60 60.0
ECA247G1467 Erigeron canadensis HOM05D003648 ORTHO05D004267 4.4e-15 86.3 87 55.2
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 5.7e-15 85.9 186 35.5
CDE11G0439 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.3e-14 84.7 83 51.8
Os02g0773600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 2.8e-14 83.6 49 81.6
Os06g0207600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 8.3e-14 82.0 40 87.5
Zm00001eb193290 Zea mays HOM05D003648 ORTHO05D004267 2.4e-13 80.5 45 77.8
SEGI_21966 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.0e-11 75.1 42 76.2
SEGI_34260 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 2.2e-11 73.9 42 73.8
QL07p024385 Quercus lobata HOM05D046221 ORTHO05D014310 1.1e-10 71.6 140 35.0
SEGI_09004 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.5e-10 71.2 39 74.4
Potri.016G059400 Populus trichocarpa HOM05D014635 ORTHO05D014310 1.9e-10 70.9 132 34.1
Rhsim03G0005000 Rhododendron simsii HOM05D003648 ORTHO05D014310 7.2e-10 68.9 189 30.7
SEGI_22789 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 9.4e-10 68.6 39 71.8
Thecc.05G174100 Theobroma cacao HOM05D014635 ORTHO05D014310 9.4e-10 68.6 121 36.4
QL07p024250 Quercus lobata HOM05D046221 ORTHO05D014310 1.6e-09 67.8 180 33.3
SEGI_00470 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 3.6e-09 66.6 38 71.1
Sabra16G0062200 Salix brachista HOM05D014635 ORTHO05D014310 4.7e-09 66.2 134 33.6
Manes.08G044100 Manihot esculenta HOM05D014635 ORTHO05D014310 8.0e-09 65.5 130 32.3
Dinv36431 Davidia involucrata HOM05D003648 ORTHO05D004267 1.0e-08 65.1 89 44.9
Duzib093G0164 Durio zibethinus HOM05D014635 ORTHO05D014310 2.3e-08 63.9 123 35.0
Gohir.D01G179100 Gossypium hirsutum HOM05D014635 ORTHO05D014310 2.0e-07 60.8 182 29.7
Gohir.A01G190633 Gossypium hirsutum HOM05D014635 ORTHO05D014310 4.4e-07 59.7 181 29.8
Aqoxy1G04270 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 7.5e-07 58.9 57 50.9
COL.COLO4_29345 Corchorus olitorius HOM05D014635 ORTHO05D014310 2.2e-06 57.4 120 29.2
Lsat_1_v5_gn_6_10680 Lactuca sativa HOM05D000375 ORTHO05D000240 6.3e-06 55.8 50 46.0
ATR0598G250 Amborella trichopoda HOM05D003648 ORTHO05D004267 8.3e-06 55.5 97 33.0


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