Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 2.0e-74 282.3 140 100.0
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 3.1e-59 231.9 140 85.0
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 3.7e-57 224.9 140 82.9
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.5e-53 212.2 143 76.2
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.4e-50 201.4 145 74.5
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 2.3e-46 189.1 144 68.1
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 8.6e-46 187.2 144 67.4
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 1.1e-45 186.8 144 68.8
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 7.3e-45 184.1 145 66.9
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 1.2e-44 183.3 144 68.1
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 2.1e-44 182.6 144 68.1
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 2.8e-44 182.2 144 64.6
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.6e-44 181.8 146 65.8
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 3.6e-44 181.8 146 65.1
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 8.1e-44 180.6 145 65.5
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 8.1e-44 180.6 146 64.4
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.1e-43 180.3 144 66.7
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.1e-43 180.3 144 66.7
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.1e-43 180.3 139 66.9
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.4e-43 179.9 144 66.7
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.4e-43 179.9 139 66.9
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 2.4e-43 179.1 145 65.5
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 2.4e-43 179.1 147 65.3
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 3.1e-43 178.7 147 64.6
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 4.0e-43 178.3 144 64.6
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 6.9e-43 177.6 144 64.6
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 8.9e-43 177.2 172 58.7
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 8.9e-43 177.2 144 61.8
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 2.6e-42 175.6 144 65.3
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 4.4e-42 174.9 149 63.1
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 4.4e-42 174.9 146 63.0
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 9.9e-42 173.7 138 63.0
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 1.3e-41 173.3 144 65.3
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.3e-41 173.3 132 65.2
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.9e-41 172.2 141 63.1
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 3.8e-41 171.8 137 62.8
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 4.9e-41 171.4 150 60.7
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 8.4e-41 170.6 144 61.1
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.1e-40 170.2 144 61.1
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.1e-40 170.2 144 61.8
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.1e-40 170.2 161 58.4
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.4e-40 169.9 144 63.2
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.4e-40 169.9 144 60.4
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.4e-40 169.9 144 60.4
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 1.4e-40 169.9 138 62.3
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.9e-40 169.5 144 60.4
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-40 168.7 144 60.4
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.2e-39 166.8 146 61.6
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.2e-39 166.8 144 63.9
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.2e-39 166.8 143 60.8
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.6e-39 166.4 144 59.7
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.6e-39 166.4 144 59.7
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.6e-39 166.4 144 59.7
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.6e-39 166.4 144 61.8
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.7e-39 165.6 144 62.5
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.5e-39 165.2 142 62.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 4.6e-39 164.9 145 61.4
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.0e-39 164.5 144 61.8
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 6.0e-39 164.5 132 62.1
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 7.8e-39 164.1 144 58.3
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.7e-38 162.9 144 57.6
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.7e-38 162.9 144 56.9
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.7e-38 162.9 140 59.3
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.7e-38 162.9 144 58.3
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.3e-38 162.5 144 58.3
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.3e-38 162.5 144 58.3
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 2.3e-38 162.5 144 58.3
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 3.9e-38 161.8 144 57.6
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 3.9e-38 161.8 146 58.9
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 5.1e-38 161.4 144 59.7
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 6.6e-38 161.0 145 57.9
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 6.6e-38 161.0 144 57.6
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 8.7e-38 160.6 121 66.9
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.5e-37 159.8 142 57.0
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.5e-37 159.1 136 60.3
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 3.3e-37 158.7 146 58.2
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 4.3e-37 158.3 144 57.6
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 4.3e-37 158.3 140 57.9
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 5.6e-37 157.9 143 58.7
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 9.6e-37 157.1 134 61.2
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 9.6e-37 157.1 134 59.7
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 2.1e-36 156.0 138 59.4
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 2.8e-36 155.6 145 56.6
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 5.3e-35 151.4 141 56.0
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 3.8e-33 145.2 128 60.2
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.4e-32 143.3 125 60.0
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 7.9e-31 137.5 121 57.0
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 1.0e-30 137.1 131 55.0
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 8.7e-30 134.0 121 57.0
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.5e-29 133.3 145 48.3
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 1.9e-29 132.9 144 54.2
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.8e-27 126.3 95 67.4
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 2.4e-27 125.9 121 55.4
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 3.1e-27 125.6 120 52.5
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 6.9e-27 124.4 138 48.6
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 6.9e-27 124.4 138 47.1
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.6e-26 122.5 113 54.9
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.1e-24 117.1 93 63.4
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 1.9e-24 116.3 89 65.2
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 3.2e-24 115.5 108 58.3
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.5e-24 114.8 136 44.1
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 9.3e-24 114.0 99 59.6
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 7.4e-21 104.4 141 41.8
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.3e-20 103.6 139 42.4
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.8e-20 102.4 140 40.7
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 6.2e-20 101.3 95 51.6
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 6.2e-20 101.3 146 39.7
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 2.4e-19 99.4 132 44.7
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 6.9e-19 97.8 122 44.3
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 7.6e-18 94.4 121 41.3
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 1.0e-17 94.0 143 42.7
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 1.4e-16 90.1 144 43.8
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.7e-15 85.9 81 49.4
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.3e-11 71.6 63 52.4
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.0e-09 67.4 64 54.7
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 7.2e-08 61.2 49 59.2
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 2.1e-07 59.7 39 64.1
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.3e-06 57.0 37 62.2
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.9e-06 55.5 58 51.7


User provided reference genes

Program Settings