Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.1e-134 483.4 265 100.0
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 7.9e-133 477.2 265 98.5
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.1e-123 446.8 265 90.9
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.4e-113 412.5 263 83.7
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.1e-113 411.8 261 83.5
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.3e-113 411.4 263 82.9
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 2.0e-112 409.5 263 82.1
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 2.0e-112 409.5 261 83.5
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.5e-112 408.7 262 83.2
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 3.5e-112 408.7 263 82.9
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.5e-112 408.7 263 83.3
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.3e-111 406.8 262 82.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.9e-111 405.6 262 83.2
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 82.9
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 3.8e-111 405.2 262 81.7
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.0e-111 404.8 263 82.5
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 8.5e-111 404.1 262 81.3
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 8.5e-111 404.1 262 81.3
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 8.5e-111 404.1 261 81.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.1e-110 403.7 262 82.4
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.1e-110 403.7 276 79.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.5e-110 403.3 263 81.0
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.5e-110 403.3 262 82.1
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 1.9e-110 402.9 262 80.9
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.9e-110 402.9 263 82.1
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 2.5e-110 402.5 262 80.5
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.2e-110 402.1 261 82.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.2e-110 401.7 262 81.3
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.2e-110 401.7 262 80.9
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 5.5e-110 401.4 263 81.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 5.5e-110 401.4 263 82.1
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 7.2e-110 401.0 263 82.1
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 1.2e-109 400.2 262 80.9
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.2e-109 400.2 263 81.0
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.6e-109 399.8 261 82.0
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.6e-109 399.8 262 80.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.6e-109 399.8 262 81.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.1e-109 399.4 262 80.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.7e-109 399.1 263 80.6
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.7e-109 399.1 263 81.0
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 3.6e-109 398.7 261 80.8
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.6e-109 398.7 261 80.8
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.6e-109 398.7 261 81.2
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 4.7e-109 398.3 255 82.7
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 6.1e-109 397.9 263 80.6
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.0e-108 397.1 263 79.8
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.4e-108 396.7 261 79.3
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.4e-108 396.7 262 79.0
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.4e-108 396.7 261 81.2
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.8e-108 396.4 261 80.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.0e-108 395.2 263 81.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 5.2e-108 394.8 263 80.6
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 6.7e-108 394.4 262 80.9
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 8.8e-108 394.0 262 80.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.2e-107 393.7 261 78.5
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 1.5e-107 393.3 261 80.5
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 2.0e-107 392.9 263 80.6
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.6e-107 392.5 261 80.1
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 3.3e-107 392.1 262 80.2
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 4.4e-107 391.7 263 79.8
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.2e-106 389.4 263 79.5
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 4.8e-106 388.3 252 81.7
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 8.3e-106 387.5 261 77.4
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.8e-105 386.3 262 76.7
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 2.4e-105 386.0 262 77.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.4e-105 386.0 265 77.7
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 3.1e-105 385.6 262 76.7
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.1e-105 385.2 262 77.9
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 5.3e-105 384.8 263 78.7
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 7.0e-105 384.4 262 76.3
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.2e-104 383.6 263 77.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-104 383.3 260 76.9
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.6e-104 383.3 260 76.9
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.0e-104 382.9 260 76.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 3.5e-104 382.1 251 81.3
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 4.5e-104 381.7 267 77.9
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 7.7e-104 380.9 260 76.5
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 7.7e-104 380.9 260 76.5
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 7.7e-104 380.9 254 80.7
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 7.7e-104 380.9 261 78.9
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.3e-103 380.2 262 76.7
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.3e-103 380.2 250 81.6
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.7e-103 379.8 262 76.3
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.7e-103 379.8 262 76.3
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 2.9e-103 379.0 263 77.6
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.8e-103 378.6 260 76.9
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.8e-103 378.6 260 76.9
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 5.0e-103 378.3 262 75.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 5.5e-102 374.8 253 78.3
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.6e-101 373.2 263 75.7
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.1e-101 372.9 256 77.3
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.6e-101 372.1 239 83.3
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 6.1e-101 371.3 251 77.7
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 6.1e-101 371.3 255 78.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.0e-100 370.5 261 75.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.8e-100 369.8 255 78.0
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 8.8e-100 367.5 262 74.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 3.4e-99 365.5 251 76.5
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 2.8e-98 362.5 285 71.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 4.1e-97 358.6 223 86.5
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.2e-96 357.1 257 75.1
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.0e-96 356.3 238 78.6
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.0e-96 356.3 284 71.5
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.7e-96 355.9 262 71.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.5e-94 349.4 263 71.1
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.2e-94 348.6 221 84.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.2e-93 347.1 264 69.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.6e-93 346.7 249 73.9
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.4e-91 339.0 265 70.2
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 9.8e-91 337.4 263 72.6
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 9.8e-91 337.4 264 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.5e-86 322.8 256 66.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.3e-82 310.5 254 65.0
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.0e-80 303.1 210 79.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 6.0e-80 301.6 263 65.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.3e-78 295.8 252 66.7
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 9.2e-73 277.7 154 98.7
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-68 263.8 255 54.1
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 7.3e-62 241.5 177 72.9
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.0e-60 235.7 263 55.5
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-55 220.7 161 76.4
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-52 211.1 152 75.7
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.4e-50 201.4 235 44.3
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.5e-46 189.9 263 47.5
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.1e-45 186.8 253 41.1
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.6e-40 169.1 229 44.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 7.9e-32 141.7 236 36.9
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 7.9e-32 141.7 95 75.8
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.7e-29 132.9 96 76.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.1e-28 129.8 75 89.3
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.5e-26 122.1 73 86.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 9.3e-25 118.2 231 35.5
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.2e-24 117.9 117 60.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.4e-20 103.6 96 61.5
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.1e-09 68.2 51 70.6
Actinidia13116 Actinidia chinensis HOM05D000001 ORTHO05D009676 4.4e-06 56.2 47 59.6


User provided reference genes

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