Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009217.2 Cucumis melo HOM05D001463 ORTHO05D001282 4.6e-68 261.2 137 100.0
CsaV3_3G034460 Cucumis sativus L. HOM05D001463 ORTHO05D001282 1.9e-45 186.0 122 86.1
ClCG10G021550 Citrullus lanatus HOM05D001463 ORTHO05D001282 7.9e-44 180.6 123 82.9
Sed0008803 Sechium edule HOM05D001463 ORTHO05D001282 1.6e-15 86.7 124 46.8
Lalb_Chr01g0022791 Lupinus albus HOM05D001463 ORTHO05D001282 2.9e-14 82.4 115 46.1
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 1.1e-13 80.5 128 46.1
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 7.2e-13 77.8 116 45.7
TPR.G34922 Trifolium pratense HOM05D001463 ORTHO05D001282 1.6e-12 76.6 110 44.5
Glyma.03G073400 Glycine max HOM05D001463 ORTHO05D001282 3.6e-12 75.5 126 42.9
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 4.7e-12 75.1 129 45.0
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 6.1e-12 74.7 134 43.3
Lalb_Chr19g0125021 Lupinus albus HOM05D001463 ORTHO05D001282 8.0e-12 74.3 133 44.4
CANSAT35G0720 Cannabis sativa HOM05D001463 ORTHO05D001282 1.4e-11 73.6 117 47.0
Prupe.6G264600 Prunus persica HOM05D001463 ORTHO05D001282 2.3e-11 72.8 129 43.4
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 3.0e-11 72.4 118 44.1
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 5.2e-11 71.6 114 43.0
Atru.chr8.2091 Acer truncatum HOM05D001463 ORTHO05D001282 8.8e-11 70.9 144 38.2
CSS0026065 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.2e-10 70.5 130 43.1
CsaV3_4G025610 Cucumis sativus L. HOM05D001463 ORTHO05D001282 1.2e-10 70.5 124 38.7
Duzib093G1451 Durio zibethinus HOM05D001463 ORTHO05D001282 2.0e-10 69.7 132 41.7
PGSC0003DMG400002161 Solanum tuberosum HOM05D001463 ORTHO05D001282 3.4e-10 68.9 108 42.6
Ciclev10013013m.g Citrus clementina HOM05D001463 ORTHO05D001282 4.4e-10 68.6 136 39.7
Solyc09g011470.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 5.7e-10 68.2 108 43.5
Sopen09g006220 Solanum pennellii HOM05D001463 ORTHO05D001282 5.7e-10 68.2 108 42.6
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 5.7e-10 68.2 133 39.1
Medtr7g065150 Medicago truncatula HOM05D001463 ORTHO05D001282 9.8e-10 67.4 110 40.9
arahy.Tifrunner.gnm1.ann1.9SAY5Z Arachis hypogaea HOM05D001463 ORTHO05D001282 1.3e-09 67.0 127 38.6
Duzib106G1514 Durio zibethinus HOM05D001463 ORTHO05D001282 1.3e-09 67.0 130 40.8
Gorai.009G095400 Gossypium raimondii HOM05D001463 ORTHO05D001282 1.7e-09 66.6 125 43.2
Haze_20884 Corylus avellana HOM05D001463 ORTHO05D001282 2.2e-09 66.2 115 44.3
Haze_20893 Corylus avellana HOM05D001463 ORTHO05D001282 2.2e-09 66.2 115 44.3
GSVIVG01024854001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.8e-09 65.9 115 37.4
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 3.7e-09 65.5 115 42.6
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 3.7e-09 65.5 105 43.8
arahy.Tifrunner.gnm1.ann1.1EL8LN Arachis hypogaea HOM05D001463 ORTHO05D001282 4.8e-09 65.1 129 36.4
MELO3C003186.2 Cucumis melo HOM05D001463 ORTHO05D001282 4.8e-09 65.1 124 37.1
Eucgr.B02296 Eucalyptus grandis HOM05D001463 ORTHO05D001282 4.8e-09 65.1 125 40.0
MD04G1139000 Malus domestica HOM05D001463 ORTHO05D001282 4.8e-09 65.1 134 39.6
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 4.8e-09 65.1 121 39.7
Gohir.D05G092800 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.3e-09 64.7 127 41.7
Manes.08G082200 Manihot esculenta HOM05D001463 ORTHO05D001282 6.3e-09 64.7 119 43.7
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 8.3e-09 64.3 112 44.6
Gohir.D09G156600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 8.3e-09 64.3 115 42.6
Rhsim04G0163100 Rhododendron simsii HOM05D001463 ORTHO05D001282 8.3e-09 64.3 143 36.4
Gorai.006G178100 Gossypium raimondii HOM05D001463 ORTHO05D001282 1.1e-08 63.9 117 41.9
ClCG04G007570 Citrullus lanatus HOM05D001463 ORTHO05D001282 1.4e-08 63.5 126 39.7
Gohir.A05G092000 Gossypium hirsutum HOM05D001463 ORTHO05D001282 1.4e-08 63.5 121 42.1
MD12G1154800 Malus domestica HOM05D001463 ORTHO05D001282 1.4e-08 63.5 129 41.1
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 1.8e-08 63.2 120 39.2
Duzib150G0778 Durio zibethinus HOM05D001463 ORTHO05D001282 2.4e-08 62.8 139 37.4
Sed0014683 Sechium edule HOM05D001463 ORTHO05D001282 2.4e-08 62.8 136 37.5
vmacro20196 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 2.4e-08 62.8 152 36.8
Cc06_g02060 Coffea canephora HOM05D001463 ORTHO05D001282 3.1e-08 62.4 116 34.5
Glyma.18G189900 Glycine max HOM05D001463 ORTHO05D001282 3.1e-08 62.4 124 39.5
Psat0s558g0040 Pisum sativum HOM05D001463 ORTHO05D001282 3.1e-08 62.4 121 40.5
MSTRG.19051 Avicennia marina HOM05D001463 ORTHO05D001282 4.1e-08 62.0 117 41.0
HanXRQChr06g0177681 Helianthus annuus HOM05D001463 ORTHO05D001282 4.1e-08 62.0 126 34.1
Lj1g0006352 Lotus japonicus HOM05D001463 ORTHO05D001282 4.1e-08 62.0 123 40.7
arahy.Tifrunner.gnm1.ann1.J6Z8IZ Arachis hypogaea HOM05D001463 ORTHO05D001282 5.4e-08 61.6 123 40.7
CARHR211340 Cardamine hirsuta HOM05D001463 ORTHO05D001282 5.4e-08 61.6 108 37.0
Lj3g0027625 Lotus japonicus HOM05D001463 ORTHO05D001282 5.4e-08 61.6 128 39.1
Peaxi162Scf00975g10014 Petunia axillaris HOM05D001463 ORTHO05D001282 5.4e-08 61.6 108 39.8
Phvul.008G114000 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 5.4e-08 61.6 122 41.8
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 7.0e-08 61.2 136 38.2
FAN02G1653 Fragaria x ananassa HOM05D001463 ORTHO05D001282 7.0e-08 61.2 128 36.7
Gohir.A09G160900 Gossypium hirsutum HOM05D001463 ORTHO05D001282 9.1e-08 60.8 117 41.9
COL.COLO4_18603 Corchorus olitorius HOM05D001463 ORTHO05D001282 1.2e-07 60.5 116 38.8
FAN14G0695 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.2e-07 60.5 128 38.3
Lalb_Chr07g0193261 Lupinus albus HOM05D001463 ORTHO05D001282 1.2e-07 60.5 109 43.1
FvH4_6g12720 Fragaria vesca HOM05D001463 ORTHO05D001282 1.6e-07 60.1 128 38.3
Hma1.2p1_1521F.1_g288640 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 1.6e-07 60.1 48 60.4
MSTRG.5625 Avicennia marina HOM05D001463 ORTHO05D001282 2.0e-07 59.7 124 37.9
Ciclev10029407m.g Citrus clementina HOM05D001463 ORTHO05D001282 2.0e-07 59.7 117 35.9
Peaxi162Scf00164g01525 Petunia axillaris HOM05D001463 ORTHO05D001282 2.7e-07 59.3 116 37.9
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 3.5e-07 58.9 127 36.2
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 3.5e-07 58.9 134 36.6
TPR.G32550 Trifolium pratense HOM05D001463 ORTHO05D001282 3.5e-07 58.9 135 34.8
Cpa.g.sc56.61 Carica papaya HOM05D001463 ORTHO05D001282 4.5e-07 58.5 105 45.7
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 4.5e-07 58.5 131 35.9
Hma1.2p1_0026F.1_g016620 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 4.5e-07 58.5 123 35.8
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 5.9e-07 58.2 137 35.8
HanXRQChr07g0202061 Helianthus annuus HOM05D001463 ORTHO05D001282 5.9e-07 58.2 129 39.5
Sp6g40420 Schrenkiella parvula HOM05D001463 ORTHO05D001282 5.9e-07 58.2 107 39.3
Solyc05g052880.4 Solanum lycopersicum HOM05D001463 ORTHO05D001282 5.9e-07 58.2 114 37.7
FvH4_3g37190 Fragaria vesca HOM05D001463 ORTHO05D001282 7.7e-07 57.8 120 35.8
HanXRQChr07g0202081 Helianthus annuus HOM05D001463 ORTHO05D001282 7.7e-07 57.8 126 38.1
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 7.7e-07 57.8 128 32.8
Oeu053786.1 Olea europaea HOM05D001463 ORTHO05D001282 7.7e-07 57.8 115 40.9
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 7.7e-07 57.8 124 38.7
Sed0005026 Sechium edule HOM05D001463 ORTHO05D001282 1.0e-06 57.4 131 35.1
FAN11G0374 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.3e-06 57.0 137 34.3
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.3e-06 57.0 120 35.8
Medtr4g019710 Medicago truncatula HOM05D001463 ORTHO05D001282 1.3e-06 57.0 130 38.5
Oeu013160.1 Olea europaea HOM05D001463 ORTHO05D001282 1.7e-06 56.6 118 37.3
DCAR_010425 Daucus carota HOM05D001463 ORTHO05D001282 2.3e-06 56.2 141 36.9
Glyma.01G105600 Glycine max HOM05D001463 ORTHO05D001282 2.3e-06 56.2 126 32.5
COL.COLO4_14694 Corchorus olitorius HOM05D001463 ORTHO05D001282 2.9e-06 55.8 125 36.0
DCAR_027565 Daucus carota HOM05D001463 ORTHO05D001282 2.9e-06 55.8 120 35.8
HanXRQChr14g0458451 Helianthus annuus HOM05D001463 ORTHO05D001282 2.9e-06 55.8 111 36.9
AUR62001723 Chenopodium quinoa HOM05D001463 ORTHO05D001282 3.8e-06 55.5 122 33.6
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 3.8e-06 55.5 123 34.1
Duzib168G0381 Durio zibethinus HOM05D001463 ORTHO05D001282 3.8e-06 55.5 122 36.9
Peaxi162Scf00140g01313 Petunia axillaris HOM05D001463 ORTHO05D001282 3.8e-06 55.5 113 37.2
DCAR_024854 Daucus carota HOM05D001463 ORTHO05D001282 5.0e-06 55.1 124 35.5
FAN05G5243 Fragaria x ananassa HOM05D001463 ORTHO05D001282 5.0e-06 55.1 125 35.2
Lsat_1_v5_gn_2_117121 Lactuca sativa HOM05D001463 ORTHO05D001282 5.0e-06 55.1 112 34.8
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 5.0e-06 55.1 141 34.0
arahy.Tifrunner.gnm1.ann1.DI08LN Arachis hypogaea HOM05D001463 ORTHO05D001282 6.6e-06 54.7 123 38.2
Glyma.07G139300 Glycine max HOM05D001463 ORTHO05D001282 8.6e-06 54.3 122 39.3
Medtr4g019690 Medicago truncatula HOM05D001463 ORTHO05D001282 8.6e-06 54.3 109 39.4
Oeu030548.1 Olea europaea HOM05D001463 ORTHO05D001282 8.6e-06 54.3 115 37.4
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 8.6e-06 54.3 123 41.5


User provided reference genes

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