Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 5.3e-31 137.1 72 100.0
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 5.8e-30 133.7 72 95.8
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 4.6e-27 124.0 72 90.3
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 1.4e-23 112.5 66 86.4
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 2.6e-22 108.2 72 77.8
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 4.5e-22 107.5 72 73.6
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 7.6e-22 106.7 70 75.7
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 5.0e-21 104.0 70 74.3
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 8.4e-21 103.2 72 73.6
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.4e-20 102.4 70 74.3
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.4e-20 102.4 72 72.2
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.9e-20 102.1 73 74.0
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 2.5e-20 101.7 73 74.0
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.5e-20 101.7 70 72.9
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 2.5e-20 101.7 73 75.3
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 3.2e-20 101.3 71 73.2
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 7.1e-20 100.1 70 70.0
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 1.2e-19 99.4 73 72.6
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 2.1e-19 98.6 72 70.8
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 2.1e-19 98.6 66 75.8
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 2.7e-19 98.2 70 68.6
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 2.7e-19 98.2 72 69.4
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.5e-19 97.8 69 71.0
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 4.6e-19 97.4 73 71.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 6.1e-19 97.1 67 70.1
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 6.1e-19 97.1 70 68.6
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 7.9e-19 96.7 66 74.2
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 7.9e-19 96.7 70 71.4
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 7.9e-19 96.7 70 68.6
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 7.9e-19 96.7 72 69.4
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 1.0e-18 96.3 71 67.6
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 1.8e-18 95.5 66 72.7
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.8e-18 95.5 72 68.1
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 1.8e-18 95.5 70 68.6
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.8e-18 95.5 72 68.1
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.8e-18 95.5 66 71.2
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 3.9e-18 94.4 70 68.6
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 8.7e-18 93.2 88 60.2
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.1e-17 92.8 67 68.7
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 1.1e-17 92.8 67 68.7
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 1.5e-17 92.4 67 67.2
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 1.5e-17 92.4 71 73.2
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 1.9e-17 92.0 67 67.2
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 3.3e-17 91.3 72 62.5
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 5.7e-17 90.5 72 62.5
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 5.7e-17 90.5 64 68.8
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 5.7e-17 90.5 68 63.2
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 9.7e-17 89.7 70 62.9
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 9.7e-17 89.7 65 69.2
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.3e-16 89.4 65 67.7
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.3e-16 89.4 65 67.7
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 1.3e-16 89.4 62 69.4
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.3e-16 89.4 66 65.2
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 1.6e-16 89.0 63 66.7
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.6e-16 89.0 63 66.7
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.6e-16 89.0 63 66.7
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.6e-16 89.0 63 66.7
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.6e-16 89.0 63 66.7
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.6e-16 89.0 70 62.9
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.2e-16 88.6 62 67.7
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 2.2e-16 88.6 67 62.7
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 2.2e-16 88.6 71 62.0
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 3.7e-16 87.8 64 67.2
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 3.7e-16 87.8 72 61.1
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 4.8e-16 87.4 61 68.9
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 4.8e-16 87.4 63 71.4
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 6.3e-16 87.0 72 61.1
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.8e-15 85.5 64 62.5
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.8e-15 85.5 66 62.1
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 2.4e-15 85.1 70 60.0
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 4.1e-15 84.3 67 61.2
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.1e-15 84.3 70 61.4
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.9e-15 83.6 64 60.9
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 9.0e-15 83.2 67 61.2
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 2.6e-14 81.6 67 58.2
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 2.6e-14 81.6 67 58.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 3.4e-14 81.3 71 54.9
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 3.4e-14 81.3 67 58.2
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 3.4e-14 81.3 62 62.9
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 2.9e-13 78.2 65 58.5
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 3.8e-13 77.8 70 58.6
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 6.5e-13 77.0 64 57.8
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 6.5e-13 77.0 68 55.9
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 6.5e-13 77.0 68 55.9
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 6.5e-13 77.0 64 57.8
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 4.2e-12 74.3 63 57.1
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 1.2e-11 72.8 72 51.4
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 2.1e-11 72.0 45 75.6
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 2.7e-11 71.6 65 55.4
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 2.7e-11 71.6 68 60.3
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 2.7e-11 71.6 69 53.6
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.4e-10 69.3 67 50.7
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 6.7e-10 67.0 44 70.5
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 8.8e-10 66.6 43 67.4
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 2.0e-09 65.5 47 72.3
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 9.7e-09 63.2 51 64.7
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.7e-08 62.4 45 71.1
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 8.2e-08 60.1 42 71.4
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 8.2e-08 60.1 45 71.1
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 1.1e-07 59.7 46 71.7
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 3.1e-07 58.2 47 61.7
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 2.0e-06 55.5 43 69.8
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 3.4e-06 54.7 53 60.4


User provided reference genes

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