Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 3.2e-95 351.7 168 100.0
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 7.3e-92 340.5 168 95.8
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.6e-91 338.2 168 95.8
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 6.2e-75 284.3 162 82.1
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.8e-74 282.7 163 81.6
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 4.0e-74 281.6 163 80.4
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.5e-73 279.6 163 81.6
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.5e-73 278.1 163 78.5
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.6e-73 277.3 161 78.3
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 7.6e-73 277.3 161 78.3
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.2e-72 275.8 163 77.9
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 2.2e-72 275.8 168 75.0
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 2.9e-72 275.4 165 77.6
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.9e-72 275.4 161 78.9
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.9e-72 275.4 161 77.6
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 3.8e-72 275.0 165 78.2
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 3.8e-72 275.0 163 77.3
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.8e-72 275.0 165 78.2
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.8e-72 275.0 165 78.2
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 4.9e-72 274.6 161 77.6
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 6.5e-72 274.2 168 76.2
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 2.5e-71 272.3 163 77.9
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.6e-70 269.6 164 76.8
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 2.1e-70 269.2 166 74.1
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.6e-70 268.1 166 72.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.0e-69 266.9 166 72.3
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 5.1e-69 264.6 163 76.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 5.1e-69 264.6 163 77.3
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.1e-69 264.6 166 71.7
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 6.7e-69 264.2 170 73.5
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.7e-69 264.2 163 76.7
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 6.7e-69 264.2 162 75.3
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.1e-68 263.5 163 75.5
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.5e-68 263.1 166 75.9
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.5e-68 263.1 163 74.2
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 3.3e-68 261.9 166 72.9
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 7.4e-68 260.8 163 74.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 7.4e-68 260.8 163 73.0
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 75.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.6e-67 259.6 163 73.0
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 3.7e-67 258.5 166 71.1
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 6.3e-67 257.7 163 74.8
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.1e-66 256.9 163 69.9
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 3.1e-66 255.4 164 75.0
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 4.1e-66 255.0 164 73.8
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 4.1e-66 255.0 162 74.7
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 5.3e-66 254.6 167 68.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 6.9e-66 254.2 164 74.4
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 9.0e-66 253.8 158 74.1
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.2e-65 253.4 163 73.0
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.6e-65 252.3 163 68.7
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.6e-65 252.3 163 71.8
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 3.4e-65 251.9 167 68.3
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 4.5e-65 251.5 163 70.6
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 7.6e-65 250.8 161 70.2
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 7.6e-65 250.8 168 70.8
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.0e-64 250.4 167 68.9
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 3.8e-64 248.4 163 71.8
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 6.5e-64 247.7 164 72.6
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 8.4e-64 247.3 169 71.6
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.4e-63 246.5 163 69.9
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.5e-63 245.7 169 69.2
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.5e-63 245.7 169 69.2
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 2.5e-63 245.7 164 72.6
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 2.5e-63 245.7 163 70.6
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 7.2e-63 244.2 163 69.9
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.6e-62 243.0 167 70.7
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 6.1e-62 241.1 161 68.9
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 6.1e-62 241.1 169 67.5
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.0e-61 240.4 169 66.9
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.3e-61 240.0 172 68.0
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.8e-61 239.6 163 69.9
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 6.7e-61 237.7 156 68.6
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 8.7e-61 237.3 161 68.3
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 8.7e-61 237.3 157 68.8
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 8.7e-61 237.3 163 69.3
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.5e-60 236.5 158 69.0
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.9e-60 236.1 161 66.5
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 5.7e-60 234.6 158 67.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 9.7e-60 233.8 164 67.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 4.8e-59 231.5 159 70.4
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 6.3e-59 231.1 162 67.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 6.9e-58 227.6 164 68.9
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.2e-57 226.9 159 64.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.5e-57 226.5 159 64.2
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 3.9e-53 211.8 137 69.3
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.9e-53 211.8 138 71.0
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 3.3e-52 208.8 137 68.6
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 9.7e-52 207.2 144 67.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 3.7e-51 205.3 166 63.3
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.1e-50 203.8 165 61.8
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.4e-49 198.7 158 60.8
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.4e-49 198.7 127 70.9
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 1.0e-48 197.2 129 74.4
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.3e-48 196.8 165 60.6
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.9e-48 195.7 137 66.4
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.9e-48 195.7 158 55.1
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 9.4e-47 190.7 161 59.0
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 6.1e-46 188.0 167 56.9
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.9e-45 185.3 161 57.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 5.1e-45 184.9 169 57.4
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.3e-43 180.3 118 67.8
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 3.1e-42 175.6 160 52.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 5.0e-40 168.3 168 53.6
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.5e-39 164.9 169 49.1
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.6e-38 163.3 172 51.7
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 2.7e-38 162.5 156 53.2
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 3.6e-38 162.2 164 47.0
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 3.6e-38 162.2 160 51.9
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 9.1e-34 147.5 143 53.1
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.2e-30 137.1 85 74.1
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 6.1e-30 134.8 162 45.1
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.5e-28 130.2 166 44.6
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.3e-27 127.1 89 68.5
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 2.4e-26 122.9 106 57.5
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.5e-23 113.6 128 48.4
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.0e-21 105.9 155 42.6
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.8e-18 96.7 82 57.3
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.5e-12 77.0 44 79.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.4e-12 75.9 119 40.3


User provided reference genes

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