Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.4e-306 1055.4 513 100.0
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.4e-266 922.5 521 83.7
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 6.0e-262 907.1 502 84.5
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.7e-253 879.0 513 81.5
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.0e-237 826.6 499 76.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 5.3e-234 814.3 514 74.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 3.5e-230 801.6 515 73.4
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-229 799.7 492 75.8
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-228 796.2 508 73.2
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.3e-228 795.0 515 72.8
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 7.4e-228 793.9 508 73.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.4e-228 793.9 515 72.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 9.7e-228 793.5 512 72.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.3e-227 793.1 492 74.6
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.6e-227 792.7 493 75.3
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.8e-227 792.0 508 72.6
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 6.3e-227 790.8 493 75.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 6.3e-227 790.8 490 75.7
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 8.2e-227 790.4 508 72.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 8.2e-227 790.4 508 72.4
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.4e-226 789.6 490 74.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.4e-226 789.6 515 72.2
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.8e-226 789.3 492 75.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 4.1e-226 788.1 517 72.3
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 5.3e-226 787.7 493 74.6
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.4e-225 785.0 492 75.0
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 5.9e-225 784.3 513 71.5
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.7e-224 782.7 501 74.9
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.8e-224 781.6 520 71.0
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 5.0e-224 781.2 501 72.7
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 4.2e-223 778.1 515 69.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.4e-221 773.1 492 73.0
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 5.1e-221 771.2 488 73.6
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.7e-221 770.8 489 73.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.1e-220 770.0 506 71.3
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.0e-220 769.2 488 71.9
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.5e-220 768.8 488 72.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 3.3e-220 768.5 488 71.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.3e-220 768.1 517 69.6
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 9.7e-220 766.9 488 72.1
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.7e-219 766.1 491 72.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.2e-219 765.8 488 71.1
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 2.4e-218 762.3 515 69.5
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 4.1e-218 761.5 544 66.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 6.9e-218 760.8 496 72.0
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.2e-217 760.0 488 71.3
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.0e-217 759.2 489 71.2
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.3e-216 756.5 488 70.7
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.7e-216 756.1 489 71.4
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 5.0e-216 754.6 488 70.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 6.5e-216 754.2 488 70.3
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.4e-215 753.1 497 70.0
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 1.4e-215 753.1 515 69.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 2.5e-215 752.3 514 72.4
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.2e-214 750.0 512 69.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.6e-214 749.6 513 70.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.7e-214 748.8 512 69.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 4.7e-214 748.0 495 70.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 6.1e-214 747.7 515 69.5
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 7.9e-214 747.3 512 70.1
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.0e-213 746.9 500 69.8
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.4e-213 746.5 488 70.3
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.4e-213 746.5 493 70.0
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 1.8e-213 746.1 512 69.7
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 8.8e-213 743.8 488 70.3
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 8.8e-213 743.8 488 70.3
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 2.0e-212 742.7 496 70.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.7e-212 740.3 520 68.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.0e-209 732.6 495 69.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.5e-207 725.7 514 68.3
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.7e-206 721.5 482 71.4
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 4.7e-206 721.5 494 67.8
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 5.7e-204 714.5 516 67.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 9.7e-204 713.8 496 70.6
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 6.3e-203 711.1 449 73.5
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.4e-202 709.9 582 60.8
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.1e-202 708.8 517 65.8
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.1e-202 708.8 494 68.8
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.1e-202 708.8 494 68.8
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 5.9e-201 704.5 527 64.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-200 703.0 523 64.6
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.7e-200 703.0 489 67.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.2e-200 702.6 495 67.3
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 3.8e-200 701.8 489 68.3
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 3.8e-200 701.8 516 65.5
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 5.2e-197 691.4 516 64.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.8e-189 666.4 480 66.7
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.3e-187 660.2 530 61.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 9.5e-183 644.0 448 68.8
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 3.6e-182 642.1 512 60.7
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.7e-182 641.7 499 62.5
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 4.4e-180 635.2 492 63.4
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 9.8e-180 634.0 496 61.9
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.9e-179 632.5 442 68.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 3.5e-177 625.5 486 61.1
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.6e-177 625.2 513 62.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 2.8e-174 615.9 353 80.7
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 6.2e-174 614.8 500 60.2
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 8.0e-174 614.4 512 60.2
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 6.8e-173 611.3 503 60.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 4.1e-162 575.5 407 68.3
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 2.9e-155 552.7 429 62.2
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 5.5e-122 442.2 385 54.5
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.1e-119 434.5 394 52.0
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 2.1e-118 430.3 386 54.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.6e-116 423.3 257 74.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.0e-115 421.4 390 51.5
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 2.9e-107 393.3 382 47.6
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.8e-67 260.0 173 68.8
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-64 251.5 162 70.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 2.0e-55 221.1 120 85.8
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.1e-36 157.9 112 67.0
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.0e-31 141.4 322 30.4
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 4.2e-29 133.7 122 53.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 5.8e-15 86.7 77 48.1
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 4.2e-13 80.5 53 64.2
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.1e-08 65.9 99 35.4
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.4e-08 65.5 67 43.3
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.4e-08 65.5 67 43.3
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.4e-08 65.5 67 43.3
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.0e-08 63.9 58 37.9
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 8.4e-06 56.2 99 29.3


User provided reference genes

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