Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009121.2 Cucumis melo HOM05D008564 ORTHO05D010893 3.4e-118 428.3 213 100.0
CsaV3_3G033290 Cucumis sativus L. HOM05D008564 ORTHO05D010893 7.3e-113 410.6 213 96.2
ClCG10G022540 Citrullus lanatus HOM05D008564 ORTHO05D010893 6.0e-107 391.0 213 90.1
Dinv25287 Davidia involucrata HOM05D008564 ORTHO05D010893 3.7e-32 142.5 205 42.4
QL07p033572 Quercus lobata HOM05D008564 ORTHO05D010893 2.5e-28 129.8 211 39.8
Thecc.05G004400 Theobroma cacao HOM05D008564 ORTHO05D010893 1.6e-27 127.1 202 42.6
Sabra16G0129300 Salix brachista HOM05D008564 ORTHO05D010893 8.0e-27 124.8 198 42.4
Hma1.2p1_2300F.1_g319270 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 2.0e-25 120.2 205 40.0
Potri.016G129400 Populus trichocarpa HOM05D008564 ORTHO05D010893 3.7e-24 115.9 203 39.9
Gohir.D01G220600 Gossypium hirsutum HOM05D008564 ORTHO05D010893 8.3e-24 114.8 198 38.9
Gorai.002G267200 Gossypium raimondii HOM05D008564 ORTHO05D010893 8.3e-24 114.8 198 38.9
Ciclev10013769m.g Citrus clementina HOM05D008564 ORTHO05D010893 3.2e-23 112.8 195 40.0
Haze_21133 Corylus avellana HOM05D008564 ORTHO05D010893 1.2e-22 110.9 118 48.3
Haze_21136 Corylus avellana HOM05D008564 ORTHO05D010893 1.2e-22 110.9 118 48.3
Atru.chr8.2355 Acer truncatum HOM05D008564 ORTHO05D010893 5.9e-22 108.6 144 47.2
Hma1.2p1_1857F.1_g305470 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 7.8e-22 108.2 183 41.0
Solyc09g014950.2 Solanum lycopersicum HOM05D008564 ORTHO05D010893 5.0e-21 105.5 195 39.5
Prupe.6G286800 Prunus persica HOM05D008564 ORTHO05D010893 6.6e-21 105.1 207 36.7
MD12G1182100 Malus domestica HOM05D008564 ORTHO05D010893 1.9e-20 103.6 200 38.5
Nitab4.5_0000047g0100 Nicotiana tabacum HOM05D008564 ORTHO05D010893 4.3e-20 102.4 206 35.4
Nitab4.5_0008225g0010 Nicotiana tabacum HOM05D008564 ORTHO05D010893 2.1e-19 100.1 209 35.9
Cpa.g.sc33.105 Carica papaya HOM05D008564 ORTHO05D010893 1.0e-18 97.8 200 37.5
Oeu023746.1 Olea europaea HOM05D008564 ORTHO05D010893 4.0e-18 95.9 170 38.2
RcHm_v2.0_Chr3g0461071 Rosa chinensis HOM05D008564 ORTHO05D010893 1.2e-17 94.4 179 39.1
FAN09G0205 Fragaria x ananassa HOM05D008564 ORTHO05D010893 3.4e-17 92.8 234 34.6
FvH4_6g10310 Fragaria vesca HOM05D008564 ORTHO05D010893 5.8e-17 92.0 189 37.6
COL.COLO4_14432 Corchorus olitorius HOM05D008564 ORTHO05D010893 9.8e-17 91.3 144 43.8
Peaxi162Scf00744g00222 Petunia axillaris HOM05D008564 ORTHO05D010893 2.4e-15 86.7 199 34.7
MD04G1168500 Malus domestica HOM05D008564 ORTHO05D010893 3.2e-15 86.3 200 33.0
FAN05G1300 Fragaria x ananassa HOM05D008564 ORTHO05D010893 7.0e-15 85.1 205 35.1
FAN05G2277 Fragaria x ananassa HOM05D008564 ORTHO05D010893 2.7e-14 83.2 210 34.3
PGSC0003DMG400026611 Solanum tuberosum HOM05D008564 ORTHO05D010893 7.8e-14 81.6 126 37.3
Medtr7g071570 Medicago truncatula HOM05D018045 ORTHO05D010893 3.0e-13 79.7 114 38.6
FAN02G3455 Fragaria x ananassa HOM05D008564 ORTHO05D010893 1.6e-11 73.9 217 32.3
Lj2C65T2 Lonicera japonica HOM05D008564 ORTHO05D010893 6.2e-11 72.0 184 33.7
Rhsim05G0227100 Rhododendron simsii HOM05D008564 ORTHO05D010893 7.5e-09 65.1 132 31.1
ATR0594G141 Amborella trichopoda HOM05D008564 ORTHO05D010893 1.3e-08 64.3 120 35.0
Glyma.09G279701 Glycine max HOM05D018045 ORTHO05D010893 1.4e-07 60.8 201 28.4
Glyma.18G209300 Glycine max HOM05D018045 ORTHO05D010893 2.4e-07 60.1 196 27.6


User provided reference genes

Program Settings