Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 8.7e-307 1056.2 558 100.0
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 4.2e-301 1037.3 558 97.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.9e-285 985.3 558 92.3
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.7e-270 935.6 558 87.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.6e-223 779.6 570 73.7
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.5e-221 772.3 558 73.8
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 3.3e-221 771.9 562 73.8
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.6e-220 768.5 559 73.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.4e-219 766.5 560 72.9
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.5e-218 763.1 571 73.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 2.0e-218 762.7 553 73.6
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-217 758.4 559 72.8
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 4.9e-217 758.1 559 72.3
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.9e-217 758.1 559 72.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.4e-216 755.7 571 70.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 7.1e-216 754.2 571 71.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.0e-214 750.4 571 71.6
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.7e-214 749.6 574 70.6
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 6.6e-214 747.7 567 69.7
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.1e-213 746.9 566 70.1
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.5e-213 746.5 559 72.1
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 9.5e-213 743.8 564 71.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.4e-211 739.2 567 70.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 4.0e-211 738.4 567 70.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 6.8e-211 737.6 562 70.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.2e-210 736.9 573 70.2
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.0e-210 736.1 563 68.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.0e-210 736.1 570 69.1
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.6e-210 735.7 572 70.5
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.6e-210 734.2 559 71.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.3e-209 733.4 568 70.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.9e-209 732.3 573 68.2
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.9e-209 732.3 565 69.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.4e-208 729.2 571 68.5
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 4.2e-208 728.4 562 68.0
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.2e-207 726.9 560 70.0
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 3.5e-207 725.3 563 69.6
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.5e-205 719.2 571 67.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 9.6e-205 717.2 566 68.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 8.1e-204 714.1 568 68.0
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.1e-203 713.8 565 66.9
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.0e-203 711.8 566 68.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-202 710.3 561 68.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.4e-202 708.8 567 67.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 3.4e-202 708.8 562 67.8
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 5.8e-202 708.0 572 68.0
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 9.9e-202 707.2 568 66.9
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.9e-200 703.0 569 66.1
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.2e-200 702.2 576 66.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 4.2e-200 701.8 595 64.7
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 9.3e-200 700.7 569 65.7
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.9e-198 695.3 570 66.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 8.7e-198 694.1 572 67.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 3.3e-197 692.2 569 68.4
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 7.3e-197 691.0 634 59.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.2e-194 683.7 563 65.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.0e-194 682.9 562 64.9
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 9.9e-194 680.6 569 63.4
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-192 676.8 559 65.5
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.4e-192 676.8 570 63.2
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.2e-192 675.6 586 61.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.6e-191 673.3 561 64.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.7e-191 672.5 567 65.6
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 4.6e-191 671.8 561 64.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.0e-190 669.1 556 64.7
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 6.7e-190 667.9 568 64.6
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 8.7e-190 667.5 564 63.3
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.1e-189 667.2 561 64.5
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.5e-189 666.8 565 65.3
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 3.3e-189 665.6 560 64.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.6e-189 664.8 559 64.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 1.3e-188 663.7 559 64.0
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.6e-188 663.3 558 66.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.4e-187 660.2 554 65.0
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 6.9e-187 657.9 559 64.0
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.5e-186 656.8 559 63.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 8.4e-185 651.0 570 61.4
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.0e-182 644.0 562 64.6
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.8e-177 625.5 526 66.3
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.5e-176 622.9 559 61.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.5e-176 622.9 559 61.4
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.1e-176 621.3 559 61.2
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 7.1e-176 621.3 564 61.3
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.6e-175 620.2 568 60.4
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.6e-175 620.2 568 60.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 9.7e-173 610.9 569 59.4
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.0e-169 600.9 527 61.5
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 8.5e-169 597.8 560 57.0
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 7.2e-168 594.7 563 58.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.7e-167 592.8 568 58.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.9e-166 589.0 579 55.6
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 6.7e-166 588.2 479 65.3
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.5e-165 586.3 482 65.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 5.1e-158 562.0 635 51.2
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.7e-151 538.9 515 58.4
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.6e-138 497.3 404 65.3
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.1e-115 419.5 397 62.7
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.6e-114 417.5 573 41.0
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.6e-114 417.5 450 54.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 3.3e-112 409.8 553 43.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 3.6e-103 379.8 584 39.2
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-98 364.8 224 79.0
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.1e-98 364.0 235 78.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.9e-92 342.8 307 65.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.2e-91 339.7 560 38.4
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 6.0e-90 335.9 591 36.7
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.5e-85 321.2 306 58.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.2e-83 313.2 251 70.5
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-72 278.5 261 59.4
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.9e-67 261.2 174 71.8
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.4e-62 244.2 378 46.6
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.5e-51 207.6 597 29.0
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.2e-51 207.2 151 72.2
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.3e-47 195.3 206 54.9
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.9e-35 154.8 157 63.1
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.1e-30 137.5 150 52.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.1e-26 123.2 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 7.3e-11 73.2 56 73.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 2.3e-09 68.2 38 81.6
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.5e-08 63.2 64 54.7


User provided reference genes

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