Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 4.6e-208 727.6 362 100.0
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 6.0e-200 700.7 362 95.9
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.6e-189 666.0 362 91.2
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.1e-181 639.0 362 87.8
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 7.0e-148 527.7 362 71.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.0e-146 523.9 362 69.9
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 2.2e-146 522.7 354 71.2
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 2.5e-145 519.2 359 68.8
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.2e-145 518.8 363 69.1
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.2e-144 516.9 359 70.2
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.7e-144 515.8 351 71.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.1e-144 514.6 363 68.6
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 2.3e-143 512.7 365 68.8
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.0e-143 512.3 364 67.6
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 6.8e-143 511.1 359 69.1
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.0e-142 509.6 359 68.8
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.6e-142 509.2 362 68.0
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 4.4e-142 508.4 349 69.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.7e-142 508.1 392 64.5
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 7.5e-142 507.7 354 69.8
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-141 506.9 355 70.1
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.2e-141 506.1 360 68.9
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 3.7e-141 505.4 355 69.6
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.7e-141 505.4 358 66.8
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 4.8e-141 505.0 346 70.8
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 4.8e-141 505.0 353 68.6
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 4.1e-140 501.9 355 69.9
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.7e-139 499.2 349 68.5
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 4.5e-139 498.4 357 68.1
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.3e-138 496.9 361 66.8
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 2.2e-138 496.1 352 68.8
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.2e-138 496.1 368 67.1
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 2.9e-138 495.7 353 66.9
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 5.0e-138 495.0 357 68.6
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 5.0e-138 495.0 357 68.6
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 5.0e-138 495.0 357 68.6
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.0e-138 495.0 357 67.2
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.1e-137 493.8 353 65.7
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.1e-137 493.8 357 66.7
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.9e-137 493.0 350 67.4
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 2.5e-137 492.7 357 66.7
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 5.5e-137 491.5 357 67.5
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 9.5e-137 490.7 358 67.3
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.6e-136 490.0 350 67.4
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.6e-136 490.0 355 68.7
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 6.1e-136 488.0 352 65.1
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.0e-135 487.3 356 65.4
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 3.0e-135 485.7 351 66.1
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.0e-135 485.7 355 67.0
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 3.0e-135 485.7 356 67.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 6.8e-135 484.6 360 65.0
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 8.8e-135 484.2 357 66.9
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 7.5e-134 481.1 355 65.4
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 9.8e-134 480.7 351 65.0
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 9.8e-134 480.7 355 65.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.7e-133 479.9 350 66.9
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.8e-133 479.2 362 66.3
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.8e-132 476.5 366 65.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 4.1e-132 475.3 350 66.0
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 7.8e-131 471.1 363 64.2
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 7.8e-131 471.1 353 63.7
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.3e-130 470.3 411 59.1
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.3e-130 469.5 393 61.3
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.6e-128 463.4 352 63.4
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.0e-127 460.7 318 70.1
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 9.8e-126 454.1 318 68.9
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.7e-125 453.4 318 69.5
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 3.7e-125 452.2 318 69.2
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 4.9e-125 451.8 349 62.5
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.8e-124 449.9 351 62.1
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 3.2e-124 449.1 354 59.9
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 5.9e-123 444.9 351 60.1
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 8.0e-120 434.5 314 66.9
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.0e-120 434.5 323 65.6
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.2e-118 430.6 356 61.0
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 2.9e-117 426.0 352 59.1
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 4.9e-117 425.2 355 60.0
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 7.8e-115 417.9 352 60.5
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.2e-112 410.6 360 58.6
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.2e-110 404.1 288 68.8
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 5.2e-95 352.1 241 68.9
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.9e-93 346.3 350 53.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 8.4e-93 344.7 350 52.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.4e-92 343.2 341 50.7
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.6e-91 340.5 341 48.1
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.6e-91 340.5 339 49.6
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.0e-90 337.8 226 72.1
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.3e-80 304.3 334 44.9
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 6.7e-74 282.0 207 70.5
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 7.9e-67 258.5 299 47.8
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 2.8e-64 250.0 182 64.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 6.9e-63 245.4 174 69.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.5e-62 244.2 466 33.9
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.4e-41 172.9 130 61.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.4e-41 172.9 130 61.5
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.9e-37 160.2 167 50.3
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 4.1e-31 139.8 262 36.6
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.8e-29 133.3 164 45.7
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 5.5e-20 102.8 88 53.4
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.2e-17 95.1 88 44.3
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.5e-17 94.7 88 45.5
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.6e-17 94.0 74 62.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.8e-10 71.2 54 64.8
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 7.0e-07 59.3 48 56.2


User provided reference genes

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