Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 1.2e-89 333.2 173 100.0
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 6.8e-85 317.4 172 95.9
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 3.5e-81 305.1 173 91.3
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 2.9e-75 285.4 172 85.5
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 1.9e-47 193.0 184 62.0
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 2.4e-45 186.0 154 67.5
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 3.1e-45 185.7 173 60.1
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 4.1e-45 185.3 180 55.0
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 6.9e-45 184.5 155 63.9
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 9.0e-45 184.1 151 64.9
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 9.0e-45 184.1 153 67.3
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 1.2e-44 183.7 159 60.4
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.2e-44 183.7 152 67.1
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 1.2e-44 183.7 147 67.3
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 3.4e-44 182.2 187 57.2
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 1.0e-43 180.6 137 69.3
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 1.3e-43 180.3 151 64.9
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 2.2e-43 179.5 159 61.6
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 2.9e-43 179.1 157 65.0
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 3.8e-43 178.7 146 66.4
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 3.8e-43 178.7 131 70.2
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 5.0e-43 178.3 159 59.1
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 8.5e-43 177.6 155 64.5
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 8.5e-43 177.6 118 77.1
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 8.5e-43 177.6 154 60.4
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 1.4e-42 176.8 148 63.5
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.4e-42 176.8 175 57.7
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 2.5e-42 176.0 118 75.4
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 2.5e-42 176.0 178 55.1
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 5.5e-42 174.9 128 67.2
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 5.5e-42 174.9 149 62.4
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 7.2e-42 174.5 148 60.8
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 7.2e-42 174.5 158 62.7
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 7.2e-42 174.5 128 68.8
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 1.2e-41 173.7 157 60.5
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 1.2e-41 173.7 175 57.1
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 1.6e-41 173.3 138 66.7
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 3.6e-41 172.2 176 59.1
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 3.6e-41 172.2 145 61.4
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 3.6e-41 172.2 131 67.2
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 3.6e-41 172.2 131 67.2
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 4.6e-41 171.8 116 73.3
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 6.1e-41 171.4 157 61.1
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 6.1e-41 171.4 118 75.4
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 7.9e-41 171.0 160 58.8
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 7.9e-41 171.0 133 66.9
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 1.8e-40 169.9 172 54.7
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 2.3e-40 169.5 131 64.9
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 2.3e-40 169.5 118 71.2
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 3.0e-40 169.1 138 65.2
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 3.9e-40 168.7 118 70.3
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 3.9e-40 168.7 118 70.3
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 5.1e-40 168.3 156 60.3
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 5.1e-40 168.3 113 70.8
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 8.8e-40 167.5 150 59.3
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 8.8e-40 167.5 179 56.4
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 1.5e-39 166.8 152 59.2
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 1.5e-39 166.8 118 69.5
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 2.0e-39 166.4 154 60.4
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 2.0e-39 166.4 138 65.2
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 2.5e-39 166.0 158 59.5
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 9.7e-39 164.1 132 66.7
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 1.3e-38 163.7 132 65.9
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 2.2e-38 162.9 151 56.3
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 4.8e-38 161.8 132 65.2
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 4.8e-38 161.8 133 65.4
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 8.2e-38 161.0 132 64.4
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 8.2e-38 161.0 132 64.4
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 8.2e-38 161.0 132 64.4
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 1.4e-37 160.2 132 64.4
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 1.4e-37 160.2 132 64.4
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.4e-37 160.2 172 51.7
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 1.4e-37 160.2 174 52.9
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.8e-37 159.8 148 56.1
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 4.1e-37 158.7 165 55.2
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 6.9e-37 157.9 132 64.4
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 9.1e-37 157.5 146 56.2
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 1.2e-36 157.1 148 57.4
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 2.0e-36 156.4 114 68.4
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 2.0e-36 156.4 137 59.1
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 4.5e-36 155.2 177 50.8
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 7.7e-36 154.5 132 62.9
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 7.7e-36 154.5 202 48.5
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 1.0e-35 154.1 132 62.9
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 1.0e-35 154.1 177 49.7
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 1.0e-35 154.1 112 67.9
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 1.0e-35 154.1 122 63.1
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 5.0e-35 151.8 127 63.8
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 1.9e-34 149.8 120 62.5
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 9.4e-34 147.5 94 74.5
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 1.2e-33 147.1 132 59.1
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 7.0e-29 131.3 127 53.5
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 1.0e-27 127.5 117 54.7
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 1.5e-26 123.6 113 50.4
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 4.4e-23 112.1 151 45.7
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 6.3e-22 108.2 124 47.6
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 8.0e-17 91.3 96 40.6
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 6.8e-16 88.2 149 38.9
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 1.3e-14 84.0 118 50.8
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.1e-13 80.9 75 53.3
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 1.6e-09 67.0 84 39.3


User provided reference genes

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