Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 2.3e-73 278.9 149 100.0
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.9e-67 259.2 146 95.2
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.6e-53 213.0 151 78.8
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 1.5e-35 153.3 126 75.4
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.4e-32 142.1 129 67.4
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 4.4e-32 141.7 142 64.1
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 4.4e-32 141.7 140 64.3
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.8e-32 141.4 129 67.4
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 6.4e-31 137.9 142 60.6
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 6.4e-31 137.9 106 70.8
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.9e-30 136.3 127 60.6
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.2e-29 133.7 135 63.0
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 2.1e-29 132.9 136 60.3
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 6.0e-29 131.3 138 59.4
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 7.8e-29 131.0 100 73.0
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.7e-28 129.8 146 56.2
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.9e-28 128.6 140 59.3
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 8.7e-28 127.5 133 60.2
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.5e-27 126.7 136 58.1
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 1.5e-27 126.7 138 58.0
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.5e-27 125.9 98 73.5
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 9.6e-27 124.0 95 74.7
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 2.1e-26 122.9 137 56.9
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 4.0e-25 118.6 135 53.3
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 5.2e-25 118.2 132 57.6
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 5.2e-25 118.2 137 55.5
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 6.9e-25 117.9 140 54.3
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 9.0e-25 117.5 136 55.1
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 1.2e-24 117.1 138 55.1
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 1.2e-24 117.1 143 53.1
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.5e-24 116.7 139 54.7
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 2.0e-24 116.3 96 71.9
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.0e-24 116.3 140 53.6
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 2.0e-24 116.3 136 57.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.4e-24 115.5 136 53.7
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 4.4e-24 115.2 151 55.6
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 4.4e-24 115.2 138 54.3
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.8e-24 114.8 104 63.5
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.8e-24 114.8 104 63.5
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 5.8e-24 114.8 136 55.9
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.6e-24 114.4 99 64.6
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 9.9e-24 114.0 106 62.3
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.3e-23 113.6 140 52.9
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.3e-23 113.6 142 52.8
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 1.7e-23 113.2 128 55.5
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.7e-23 113.2 133 54.1
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.7e-23 113.2 135 55.6
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.9e-23 112.5 102 63.7
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 2.9e-23 112.5 130 53.8
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 3.8e-23 112.1 136 51.5
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.8e-23 112.1 136 51.5
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 4.9e-23 111.7 136 50.7
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.4e-22 110.2 144 54.9
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 1.9e-22 109.8 133 53.4
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 1.9e-22 109.8 91 67.0
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.9e-22 109.8 136 50.7
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.2e-21 107.1 137 50.4
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 2.1e-21 106.3 87 72.4
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 2.3e-20 102.8 100 62.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 3.0e-20 102.4 139 51.1
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.0e-20 102.4 89 64.0
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 6.6e-20 101.3 127 49.6
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 8.7e-20 100.9 127 49.6
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 2.5e-19 99.4 145 49.7
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 3.3e-19 99.0 106 57.5
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 3.3e-19 99.0 100 57.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.3e-19 97.8 141 46.1
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.3e-18 97.1 126 48.4
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.1e-18 96.3 104 55.8
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.8e-18 95.9 127 47.2
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 2.8e-18 95.9 143 46.9
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 3.6e-18 95.5 126 53.2
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 6.2e-18 94.7 97 60.8
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.2e-18 94.7 102 57.8
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.1e-17 94.0 139 45.3
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 1.1e-17 94.0 67 74.6
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.1e-17 94.0 136 44.1
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.1e-17 92.4 103 55.3
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.1e-17 92.4 126 47.6
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 4.0e-17 92.0 97 53.6
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 4.0e-17 92.0 131 51.9
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 9.0e-17 90.9 130 47.7
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 4.5e-16 88.6 131 47.3
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 5.8e-16 88.2 125 47.2
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.6e-16 87.8 144 47.9
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 7.6e-16 87.8 136 44.1
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.2e-15 86.3 101 53.5
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 3.8e-15 85.5 93 61.3
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 2.4e-14 82.8 134 45.5
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 5.4e-14 81.6 96 59.4
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 5.4e-14 81.6 132 44.7
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 9.3e-14 80.9 126 46.8
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.2e-13 80.5 133 43.6
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 1.0e-12 77.4 93 48.4
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.9e-11 73.2 130 43.1
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 9.6e-11 70.9 97 48.5
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 3.7e-10 68.9 99 44.4
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 8.1e-10 67.8 115 40.0
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 3.1e-09 65.9 139 38.1
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 5.3e-09 65.1 112 40.2
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 5.3e-09 65.1 92 46.7
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 6.9e-09 64.7 52 71.2
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 2.0e-08 63.2 96 46.9
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 1.7e-07 60.1 107 43.9
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 2.2e-07 59.7 96 44.8
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 2.9e-07 59.3 123 36.6
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 4.9e-07 58.5 111 38.7
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 1.1e-06 57.4 99 40.4
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 5.5e-06 55.1 112 37.5


User provided reference genes

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