Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 0.0e+00 1365.9 688 100.0
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 6.9e-306 1053.5 663 83.0
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 4.1e-274 948.0 673 74.3
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 1.1e-255 886.7 647 72.3
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 3.1e-189 666.0 673 55.6
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.2e-188 664.1 672 56.0
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 5.3e-181 638.6 652 54.3
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.1e-178 630.9 682 53.7
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 3.6e-177 625.9 671 51.9
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 2.0e-172 610.1 672 52.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 2.9e-171 606.3 662 51.4
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 6.5e-171 605.1 680 52.5
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 8.5e-171 604.7 668 51.6
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.5e-170 604.0 669 51.9
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 4.2e-170 602.4 675 51.4
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 3.6e-169 599.4 691 50.4
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 4.0e-168 595.9 661 52.0
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 2.6e-167 593.2 674 50.1
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 3.4e-167 592.8 661 50.8
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 5.7e-167 592.0 642 52.0
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 7.5e-167 591.7 659 51.9
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.4e-165 585.5 662 52.0
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 5.4e-165 585.5 680 50.1
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 5.4e-165 585.5 668 50.0
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.1e-165 584.7 676 50.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.6e-164 583.9 659 51.6
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 5.9e-164 582.0 668 49.6
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.9e-163 579.7 689 48.8
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.9e-162 577.0 684 47.5
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.6e-161 573.9 661 49.8
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 3.6e-161 572.8 656 49.5
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 4.4e-159 565.8 661 48.9
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 5.7e-159 565.5 671 47.8
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.7e-158 563.9 677 48.7
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.9e-155 553.1 585 52.8
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 3.8e-155 552.7 640 49.4
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.6e-154 548.9 664 48.0
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.6e-153 547.4 683 46.6
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.0e-152 544.7 578 50.9
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 8.9e-152 541.6 617 49.1
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 3.4e-151 539.7 632 48.1
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.2e-150 537.0 666 46.2
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 3.7e-150 536.2 703 45.4
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 8.3e-150 535.0 652 46.9
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 8.3e-150 535.0 672 45.2
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.3e-147 526.9 665 47.5
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 2.3e-147 526.9 683 47.1
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 5.0e-147 525.8 661 47.2
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.9e-146 523.9 648 46.8
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 3.3e-146 523.1 638 46.9
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 9.5e-146 521.5 670 46.6
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.2e-145 521.2 663 46.8
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 4.0e-144 516.2 636 47.8
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.2e-144 515.8 667 46.2
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 4.4e-143 512.7 672 45.5
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.9e-142 510.0 642 46.9
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 7.0e-141 505.4 668 46.0
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 9.2e-141 505.0 664 45.9
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.1e-140 503.8 657 45.2
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 2.7e-140 503.4 653 45.9
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 6.0e-140 502.3 690 44.8
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 2.3e-139 500.4 623 46.9
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.1e-139 499.2 664 44.7
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.5e-138 497.7 653 44.7
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.3e-138 496.5 664 45.2
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.6e-137 494.2 677 44.8
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 2.8e-137 493.4 613 46.0
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.8e-136 490.7 617 46.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 5.2e-136 489.2 632 45.7
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 9.9e-135 485.0 665 44.4
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.7e-134 484.2 654 44.3
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.9e-133 480.7 590 46.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.4e-133 479.2 566 47.7
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 7.8e-132 475.3 689 43.1
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.1e-130 471.5 636 43.7
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 3.3e-130 469.9 683 42.8
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 4.3e-130 469.5 565 47.6
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 9.5e-130 468.4 663 43.6
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 1.6e-129 467.6 664 43.5
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 6.2e-129 465.7 669 42.8
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 6.2e-129 465.7 682 43.0
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 2.0e-127 460.7 603 43.9
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 9.9e-127 458.4 635 42.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.7e-126 457.6 564 46.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 8.4e-126 455.3 632 42.7
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.9e-125 454.1 485 51.3
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 5.1e-123 446.0 665 41.8
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 6.2e-121 439.1 667 41.8
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 8.1e-121 438.7 650 42.0
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 5.8e-119 432.6 670 40.7
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.3e-118 431.4 441 51.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 2.9e-118 430.3 623 42.5
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.3e-115 421.4 622 43.2
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 8.1e-113 412.1 689 39.3
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 2.2e-110 404.1 656 38.9
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 3.2e-109 400.2 403 52.6
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 5.8e-103 379.4 574 40.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.8e-86 323.6 427 44.7
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.7e-76 290.8 571 34.3
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.7e-73 280.4 563 35.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 3.9e-67 260.4 597 32.2
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 2.8e-65 254.2 665 32.3
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 5.0e-54 216.9 368 41.0
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.5e-53 215.3 177 61.0
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.7e-49 200.7 317 36.6
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.5e-47 194.1 173 60.1
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.2e-28 132.5 531 25.4
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 7.8e-23 113.2 361 30.5
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.9e-21 108.6 128 48.4
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.1e-20 105.1 125 48.8
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.1e-20 105.1 125 48.8
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.1e-19 102.8 584 22.3
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.3e-19 101.7 131 46.6
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.3e-19 101.7 131 46.6
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 3.1e-19 101.3 474 23.0
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 5.2e-11 73.9 69 52.2
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.1e-08 63.5 163 32.5
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.6e-07 62.4 131 32.8


User provided reference genes

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