Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 8.2e-81 303.9 182 100.0
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 3.4e-74 282.0 182 92.3
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.5e-63 245.4 182 84.6
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 3.2e-40 169.1 180 58.9
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 4.9e-33 145.2 185 47.0
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.9e-32 143.3 184 52.7
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 1.9e-32 143.3 183 50.3
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.9e-32 143.3 183 55.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.1e-31 139.8 167 49.1
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.5e-31 139.0 180 61.7
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.0e-30 137.5 95 72.6
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.3e-30 136.3 172 46.5
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 8.6e-30 134.4 189 48.1
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.1e-29 134.0 87 75.9
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.5e-29 133.7 96 70.8
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.5e-29 132.9 189 47.6
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 3.3e-29 132.5 97 69.1
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 4.3e-29 132.1 179 48.0
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 5.6e-29 131.7 69 87.0
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 1.2e-28 130.6 97 66.0
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 2.1e-28 129.8 193 46.1
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 3.6e-28 129.0 71 83.1
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.6e-28 129.0 69 85.5
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 3.6e-28 129.0 71 83.1
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 4.7e-28 128.6 71 81.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 4.7e-28 128.6 187 46.0
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 4.7e-28 128.6 71 83.1
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 6.2e-28 128.3 71 84.5
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 6.2e-28 128.3 177 60.5
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 6.2e-28 128.3 194 49.5
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 8.1e-28 127.9 96 67.7
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.1e-27 127.5 94 67.0
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.4e-27 127.1 77 77.9
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.4e-27 127.1 77 77.9
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.4e-27 127.1 71 83.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.8e-27 126.7 92 67.4
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 2.4e-27 126.3 70 82.9
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 5.2e-27 125.2 72 77.8
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 6.9e-27 124.8 70 80.0
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 8.9e-27 124.4 170 44.7
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 8.9e-27 124.4 171 43.9
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 8.9e-27 124.4 171 43.9
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 8.9e-27 124.4 93 65.6
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.2e-26 124.0 173 59.5
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.2e-26 124.0 72 77.8
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.2e-26 124.0 193 43.0
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 2.0e-26 123.2 68 83.8
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 2.6e-26 122.9 93 63.4
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 2.6e-26 122.9 95 65.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 3.4e-26 122.5 93 63.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 4.4e-26 122.1 192 56.8
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 4.4e-26 122.1 94 63.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 4.4e-26 122.1 94 63.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 4.4e-26 122.1 94 63.8
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 4.4e-26 122.1 71 77.5
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 4.4e-26 122.1 70 77.1
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 5.8e-26 121.7 173 43.9
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 5.8e-26 121.7 96 61.5
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.6e-26 121.3 71 76.1
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.6e-26 121.3 71 76.1
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 9.9e-26 120.9 181 40.3
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 9.9e-26 120.9 95 65.3
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 9.9e-26 120.9 69 78.3
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.3e-25 120.6 94 62.8
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.3e-25 120.6 68 79.4
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.3e-25 120.6 68 79.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.3e-25 120.6 68 82.4
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.2e-25 119.8 93 65.6
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 2.2e-25 119.8 184 50.5
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.2e-25 119.8 184 50.5
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.9e-25 119.4 84 71.4
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.9e-25 119.4 87 69.0
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.8e-25 119.0 84 67.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 3.8e-25 119.0 84 67.9
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.8e-25 119.0 83 71.1
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.8e-25 119.0 83 71.1
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 4.9e-25 118.6 71 74.6
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 4.9e-25 118.6 95 64.2
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 6.4e-25 118.2 84 67.9
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 8.4e-25 117.9 71 76.1
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 8.4e-25 117.9 71 76.1
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.1e-24 117.5 69 75.4
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.4e-24 117.1 95 63.2
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 1.9e-24 116.7 93 60.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 9.3e-24 114.4 176 39.2
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 6.6e-22 108.2 66 72.7
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 6.6e-22 108.2 66 72.7
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-21 106.7 70 74.3
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.5e-21 106.3 161 44.7
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 3.3e-21 105.9 94 55.3
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.3e-20 104.0 161 44.1
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 6.2e-20 101.7 71 64.8
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.1e-19 100.9 98 53.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.4e-19 100.5 69 71.0
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 5.3e-19 98.6 63 69.8
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 3.4e-18 95.9 83 57.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.7e-17 93.6 70 61.4
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.9e-15 84.7 76 53.9
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.9e-13 80.1 54 61.1


User provided reference genes

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