Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007672.2 Cucumis melo HOM05D008539 ORTHO05D010637 1.5e-281 972.2 504 100.0
CsaV3_6G044500 Cucumis sativus L. HOM05D008539 ORTHO05D010637 6.8e-250 867.1 504 86.5
ClCG01G017970 Citrullus lanatus HOM05D008539 ORTHO05D010637 2.3e-210 735.7 507 76.9
Sed0007885 Sechium edule HOM05D008539 ORTHO05D010637 1.5e-135 487.3 476 60.9
Haze_03958 Corylus avellana HOM05D008539 ORTHO05D010637 1.0e-51 208.8 571 32.0
Prupe.6G212800 Prunus persica HOM05D008539 ORTHO05D010637 1.6e-49 201.4 576 32.1
Cfa006803 Carpinus fangiana HOM05D000349 ORTHO05D000620 1.4e-48 198.4 571 31.3
Ciclev10025260m.g Citrus clementina HOM05D008539 ORTHO05D010637 6.3e-46 189.5 484 35.7
Atru.chr3.1092 Acer truncatum HOM05D008539 ORTHO05D010637 1.2e-44 185.3 570 32.3
Dinv26981 Davidia involucrata HOM05D000349 ORTHO05D010637 1.7e-43 181.4 446 34.8
FvH4_1g18650 Fragaria vesca HOM05D008539 ORTHO05D010637 9.4e-42 175.6 547 30.9
Manes.13G106500 Manihot esculenta HOM05D008539 ORTHO05D010637 2.1e-41 174.5 567 31.2
RcHm_v2.0_Chr2g0109471 Rosa chinensis HOM05D008539 ORTHO05D010637 1.0e-40 172.2 429 34.3
Thecc.01G080200 Theobroma cacao HOM05D008539 ORTHO05D010637 3.0e-40 170.6 421 36.8
FAN26G2853 Fragaria x ananassa HOM05D008539 ORTHO05D010637 2.2e-38 164.5 546 30.4
FAN23G1883 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.1e-37 162.2 540 30.9
FAN28G0277 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.2e-36 158.7 538 29.6
Gohir.D11G212700 Gossypium hirsutum HOM05D008539 ORTHO05D010637 2.6e-36 157.5 479 32.4
CANSAT01G2572 Cannabis sativa HOM05D008539 ORTHO05D010637 4.5e-36 156.8 472 31.4
Gorai.007G228600 Gossypium raimondii HOM05D008539 ORTHO05D010637 5.9e-36 156.4 479 32.2
CiPaw.08G148100 Carya illinoinensis HOM05D008539 ORTHO05D010637 9.4e-34 149.1 561 29.6
COL.COLO4_11651 Corchorus olitorius HOM05D008539 ORTHO05D010637 1.6e-33 148.3 483 31.7
QL06p038103 Quercus lobata HOM05D008539 ORTHO05D010637 1.8e-32 144.8 530 30.0
Gohir.A11G210466 Gossypium hirsutum HOM05D008539 ORTHO05D010637 3.0e-32 144.1 545 30.3
Hma1.2p1_1147F.1_g261540 Hydrangea macrophylla HOM05D008539 ORTHO05D010637 6.3e-30 136.3 382 33.8
Nn5g30717 Nelumbo nucifera HOM05D008539 ORTHO05D010637 4.1e-29 133.7 591 27.6
arahy.Tifrunner.gnm1.ann1.P8GH0J Arachis hypogaea HOM05D008539 ORTHO05D010637 3.8e-27 127.1 263 36.9
arahy.Tifrunner.gnm1.ann1.W1L6ST Arachis hypogaea HOM05D008539 ORTHO05D010637 3.8e-27 127.1 263 36.9
MBI16_g05035_MAGBIO Magnolia biondii HOM05D008539 ORTHO05D010637 3.2e-26 124.0 342 33.0
Potri.007G009000 Populus trichocarpa HOM05D008539 ORTHO05D010637 7.2e-26 122.9 362 32.0
Ciclev10007100m.g Citrus clementina HOM05D008539 ORTHO05D010637 3.6e-25 120.6 315 35.6
ATR0767G189 Amborella trichopoda HOM05D008539 ORTHO05D010637 5.2e-24 116.7 443 29.1
Sc07g0000280 Simmondsia chinensis HOM05D008539 ORTHO05D010637 2.6e-23 114.4 262 34.7
PSO541G5024 Papaver somniferum HOM05D008539 ORTHO05D010637 6.3e-22 109.8 371 30.7
PSO675G5298 Papaver somniferum HOM05D008539 ORTHO05D010637 2.7e-20 104.4 564 26.4
SEGI_19235 Sequoiadendron giganteum HOM05D008539 ORTHO05D010637 4.5e-20 103.6 309 27.8
Glyma.11G044300 Glycine max HOM05D008539 ORTHO05D010637 1.3e-19 102.1 262 32.4
FAN19G1588 Fragaria x ananassa HOM05D008539 ORTHO05D010637 6.5e-19 99.8 569 26.9
Glyma.01G197400 Glycine max HOM05D008539 ORTHO05D010637 3.2e-18 97.4 500 25.8
TAR628G0786 Trochodendron aralioides HOM05D008539 ORTHO05D010637 3.6e-17 94.0 278 29.9
Lalb_Chr09g0323801 Lupinus albus HOM05D008539 ORTHO05D010637 1.4e-16 92.0 383 29.0
Cc07_g07630 Coffea canephora HOM05D008539 ORTHO05D010637 8.8e-16 89.4 194 35.6
Cpa.g.sc129.44 Carica papaya HOM05D008539 ORTHO05D010637 3.4e-15 87.4 307 30.3
Mapoly0011s0007 Marchantia polymorpha HOM05D008539 ORTHO05D010637 1.7e-14 85.1 229 32.8
Phvul.002G008000 Phaseolus vulgaris HOM05D008539 ORTHO05D010637 4.8e-14 83.6 431 25.8
TAR628G1178 Trochodendron aralioides HOM05D008539 ORTHO05D010637 5.4e-13 80.1 314 29.9
Sabra07G0006900 Salix brachista HOM05D002093 ORTHO05D008902 6.1e-09 66.6 226 27.9
VMungo1215G1773 Vigna mungo HOM05D008539 ORTHO05D010637 8.0e-09 66.2 451 24.4
Medtr5g014750 Medicago truncatula HOM05D008539 ORTHO05D010637 3.0e-08 64.3 226 28.3


User provided reference genes

Program Settings