Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.0e-222 773.9 387 100.0
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 7.4e-172 607.4 306 98.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.3e-165 585.9 306 93.5
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 5.0e-160 568.2 390 75.9
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 3.2e-159 565.5 306 89.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.7e-158 562.4 306 88.9
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 4.7e-158 561.6 307 88.9
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 3.0e-157 558.9 306 87.9
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 5.2e-157 558.1 307 87.6
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 8.8e-157 557.4 307 87.6
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 4.8e-155 551.6 306 86.3
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 5.3e-154 548.1 306 85.3
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 9.1e-154 547.4 325 82.5
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.6e-153 546.6 307 85.7
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 3.5e-153 545.4 307 87.0
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 5.9e-153 544.7 307 86.6
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.0e-152 543.9 306 85.3
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.0e-152 543.9 306 85.6
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.7e-152 543.1 306 84.6
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.2e-152 542.7 307 85.3
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 2.9e-152 542.3 306 85.3
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.8e-152 542.0 306 84.6
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 3.8e-152 542.0 307 85.3
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.5e-152 540.8 306 84.6
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.1e-151 540.4 307 85.7
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.1e-151 540.4 306 86.3
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.1e-151 540.4 306 85.3
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.2e-151 538.9 307 85.3
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 3.2e-151 538.9 307 86.3
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 3.2e-151 538.9 306 84.6
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 4.2e-151 538.5 306 84.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.6e-150 536.6 307 84.4
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 8.0e-150 534.3 307 85.3
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.0e-149 533.9 307 84.4
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.8e-149 533.1 307 83.4
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.8e-149 533.1 306 84.3
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 2.3e-149 532.7 307 84.0
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.0e-149 531.9 322 80.7
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 4.0e-149 531.9 307 83.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 5.2e-149 531.6 307 83.4
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 7.5e-148 527.7 307 84.0
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 7.5e-148 527.7 307 84.0
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 7.5e-148 527.7 307 82.1
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 9.7e-148 527.3 307 82.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.3e-147 526.9 307 83.7
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.8e-147 525.8 306 81.7
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 3.7e-147 525.4 307 83.4
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 3.7e-147 525.4 306 82.7
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 2.4e-146 522.7 307 81.1
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.4e-146 522.7 306 83.0
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.0e-145 519.6 307 80.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 4.5e-145 518.5 304 81.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.2e-144 516.2 307 79.2
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.9e-144 515.8 307 79.8
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.2e-143 511.9 307 79.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.2e-142 510.4 307 79.5
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.6e-142 510.0 307 80.8
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 2.1e-142 509.6 307 78.8
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 4.7e-142 508.4 358 72.1
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.4e-141 506.9 288 84.0
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.3e-139 500.4 307 79.5
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 8.3e-139 497.7 306 76.1
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 5.4e-138 495.0 305 81.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 7.0e-138 494.6 370 68.1
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 1.2e-137 493.8 307 75.6
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.0e-136 490.7 307 76.9
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.7e-136 490.0 306 76.5
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 6.6e-136 488.0 307 75.9
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.1e-135 487.3 307 76.2
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.5e-135 486.9 371 66.0
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.8e-134 482.6 330 76.1
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.0e-134 481.1 276 83.7
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.2e-133 478.4 275 83.6
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 3.7e-131 472.2 307 74.3
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 5.0e-128 461.8 307 75.2
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 5.2e-125 451.8 277 76.9
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.9e-123 445.3 307 71.0
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.2e-122 442.6 293 75.4
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.7e-121 439.5 278 75.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.5e-121 439.1 243 86.4
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 5.6e-119 431.8 277 74.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 3.1e-117 426.0 235 86.8
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 3.5e-113 412.5 312 63.8
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 6.0e-113 411.8 310 64.8
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 4.3e-111 405.6 314 68.2
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 2.7e-105 386.3 236 77.1
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.0e-104 384.4 306 59.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 7.3e-103 378.3 297 61.6
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 4.6e-81 305.8 333 49.5
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.5e-79 300.1 266 60.2
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 9.9e-76 288.1 190 71.6
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.7e-63 245.7 130 88.5
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.0e-59 235.0 310 43.2
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.4e-58 231.1 170 70.6
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.9e-58 230.7 148 75.7
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.4e-56 224.6 281 44.5
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.5e-55 220.3 568 28.7
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.9e-26 124.4 88 72.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.8e-22 110.5 72 75.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 3.7e-22 110.2 70 70.0
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 3.5e-20 103.6 100 49.0
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.0e-19 102.1 303 28.7
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 2.3e-08 64.3 39 82.1
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 5.8e-07 59.7 53 62.3
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 8.3e-06 55.8 173 28.3


User provided reference genes

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