Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007617.2 Cucumis melo HOM05D004032 ORTHO05D004462 3.5e-101 371.7 196 100.0
CsaV3_6G043920 Cucumis sativus L. HOM05D004032 ORTHO05D004462 1.3e-76 290.0 172 89.0
ClCG01G017390 Citrullus lanatus HOM05D004032 ORTHO05D004462 1.1e-70 270.4 175 81.1
Sed0005334 Sechium edule HOM05D004032 ORTHO05D004462 5.3e-49 198.4 153 75.8
Sed0022630 Sechium edule HOM05D004032 ORTHO05D004462 1.8e-41 173.3 169 63.9
CiPaw.02G004200 Carya illinoinensis HOM05D004032 ORTHO05D004462 8.2e-18 94.7 203 38.4
Haze_15306 Corylus avellana HOM05D004032 ORTHO05D004462 4.1e-17 92.4 204 35.8
QL06p039858 Quercus lobata HOM05D004032 ORTHO05D004462 5.9e-16 88.6 197 37.6
Duzib147G1493 Durio zibethinus HOM05D004032 ORTHO05D004462 8.5e-15 84.7 201 34.8
CiPaw.01G006700 Carya illinoinensis HOM05D004032 ORTHO05D004462 4.2e-14 82.4 202 33.7
Prupe.6G223500 Prunus persica HOM05D004032 ORTHO05D004462 2.1e-13 80.1 211 35.1
GSVIVG01000145001 Vitis vinifera HOM05D004032 ORTHO05D004462 4.6e-13 79.0 183 37.2
RcHm_v2.0_Chr2g0107481 Rosa chinensis HOM05D004032 ORTHO05D004462 1.0e-12 77.8 187 36.9
DCAR_025783 Daucus carota HOM05D004032 ORTHO05D004462 2.3e-12 76.6 199 36.7
Manes.13G113400 Manihot esculenta HOM05D004032 ORTHO05D004462 2.3e-12 76.6 202 35.6
VMungo0251G2494 Vigna mungo HOM05D004032 ORTHO05D004462 2.3e-12 76.6 196 34.2
Gohir.D11G206500 Gossypium hirsutum HOM05D004032 ORTHO05D004462 3.0e-12 76.3 199 34.7
Phvul.003G236700 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 3.0e-12 76.3 196 34.2
Gorai.007G221700 Gossypium raimondii HOM05D004032 ORTHO05D004462 3.9e-12 75.9 199 34.7
Potri.007G053300 Populus trichocarpa HOM05D004032 ORTHO05D004462 3.9e-12 75.9 201 34.8
Duzib187G1312 Durio zibethinus HOM05D004032 ORTHO05D004462 6.7e-12 75.1 199 34.2
FAN28G1831 Fragaria x ananassa HOM05D004032 ORTHO05D004462 6.7e-12 75.1 187 35.3
Lj4g0009335 Lotus japonicus HOM05D004032 ORTHO05D004462 6.7e-12 75.1 186 37.6
Potri.005G145800 Populus trichocarpa HOM05D004032 ORTHO05D004462 6.7e-12 75.1 182 36.8
Gohir.A11G216800 Gossypium hirsutum HOM05D004032 ORTHO05D004462 8.8e-12 74.7 199 34.7
TWI09G0556 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 8.8e-12 74.7 180 36.7
Glyma.17G163400 Glycine max HOM05D004032 ORTHO05D004462 2.0e-11 73.6 196 34.7
Sabra05G0116500 Salix brachista HOM05D004032 ORTHO05D004462 2.5e-11 73.2 186 34.9
Glyma.11G049700 Glycine max HOM05D004032 ORTHO05D004462 3.3e-11 72.8 206 34.0
Glyma.01G192400 Glycine max HOM05D004032 ORTHO05D004462 5.7e-11 72.0 205 32.2
Thecc.01G069300 Theobroma cacao HOM05D004032 ORTHO05D004462 9.7e-11 71.2 200 31.5
TAR376G0432 Trochodendron aralioides HOM05D004032 ORTHO05D004462 9.7e-11 71.2 194 34.5
TWI53G0135 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 1.3e-10 70.9 180 33.9
DCAR_010831 Daucus carota HOM05D004032 ORTHO05D004462 2.8e-10 69.7 177 39.0
Medtr4g095440 Medicago truncatula HOM05D004032 ORTHO05D004462 2.8e-10 69.7 189 37.0
TPR.G23878 Trifolium pratense HOM05D004032 ORTHO05D004462 2.8e-10 69.7 189 36.5
Psat4g083520 Pisum sativum HOM05D004032 ORTHO05D004462 3.7e-10 69.3 186 35.5
FvH4_1g17290 Fragaria vesca HOM05D004032 ORTHO05D004462 4.8e-10 68.9 156 36.5
FAN19G2997 Fragaria x ananassa HOM05D004032 ORTHO05D004462 4.8e-10 68.9 156 36.5
Glyma.05G103900 Glycine max HOM05D004032 ORTHO05D004462 1.1e-09 67.8 193 33.7
Ciclev10026503m.g Citrus clementina HOM05D004032 ORTHO05D004462 1.8e-09 67.0 205 33.2
CSS0026387 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 5.3e-09 65.5 180 33.9
COL.COLO4_11544 Corchorus olitorius HOM05D004032 ORTHO05D004462 5.3e-09 65.5 183 33.9
CSS0022714 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 9.1e-09 64.7 180 35.0
Dinv26906 Davidia involucrata HOM05D004032 ORTHO05D004462 1.5e-08 63.9 188 31.4
Dinv30069 Davidia involucrata HOM05D004032 ORTHO05D004462 1.5e-08 63.9 198 32.8
Lsat_1_v5_gn_4_162340 Lactuca sativa HOM05D004032 ORTHO05D004462 2.6e-08 63.2 190 31.6
Manes.12G111200 Manihot esculenta HOM05D004032 ORTHO05D004462 1.0e-07 61.2 207 33.8
HanXRQChr11g0322451 Helianthus annuus HOM05D004032 ORTHO05D004462 1.3e-07 60.8 184 32.6
Gohir.D03G027200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 1.7e-07 60.5 196 28.6
Cpa.g.sc6.44 Carica papaya HOM05D004032 ORTHO05D004462 3.8e-07 59.3 202 30.7
Gohir.A02G153200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 3.8e-07 59.3 196 30.6
Nn1g04611 Nelumbo nucifera HOM05D004032 ORTHO05D004462 3.8e-07 59.3 192 32.3
MD15G1293900 Malus domestica HOM05D004032 ORTHO05D004462 5.0e-07 58.9 228 32.9
Lalb_Chr05g0213571 Lupinus albus HOM05D004032 ORTHO05D004462 6.5e-07 58.5 200 32.5
Phvul.002G012400 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 1.1e-06 57.8 135 37.8
FAN23G1545 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.4e-06 57.4 103 41.7
Aqoxy6G02719 Aquilegia oxysepala HOM05D004032 ORTHO05D004462 2.5e-06 56.6 199 30.7
FAN26G2221 Fragaria x ananassa HOM05D004032 ORTHO05D004462 2.5e-06 56.6 103 40.8
Rhsim10G0102400 Rhododendron simsii HOM05D004032 ORTHO05D004462 3.2e-06 56.2 176 32.4
Eucgr.I00716 Eucalyptus grandis HOM05D004032 ORTHO05D004462 7.2e-06 55.1 191 31.4


User provided reference genes

Program Settings