Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007608.2 Cucumis melo HOM05D005680 ORTHO05D006334 2.4e-41 171.8 91 100.0
ClCG01G017300 Citrullus lanatus HOM05D005680 ORTHO05D006334 1.7e-34 149.1 91 89.0
CsaV3_6G043830 Cucumis sativus L. HOM05D005680 ORTHO05D006334 1.3e-29 132.9 82 90.2
EL10Ac6g15662 Beta vulgaris HOM05D005680 ORTHO05D006334 6.5e-18 94.0 94 61.7
TAR376G0914 Trochodendron aralioides HOM05D005680 ORTHO05D006334 3.2e-17 91.7 84 61.9
Ciclev10026786m.g Citrus clementina HOM05D005680 ORTHO05D006334 2.7e-16 88.6 103 55.3
TAR628G1700 Trochodendron aralioides HOM05D005680 ORTHO05D006334 1.0e-15 86.7 67 67.2
Haze_15319 Corylus avellana HOM05D005680 ORTHO05D006334 2.3e-15 85.5 84 60.7
Ah.03g146390 Amaranthus hybridus HOM05D005680 ORTHO05D006334 3.9e-15 84.7 91 53.8
Thecc.01G068000 Theobroma cacao HOM05D005680 ORTHO05D006334 3.9e-15 84.7 94 55.3
Atru.chr13.75 Acer truncatum HOM05D005680 ORTHO05D006334 5.1e-15 84.3 81 58.0
AUR62003966 Chenopodium quinoa HOM05D005680 ORTHO05D006334 8.8e-15 83.6 90 56.7
TAR625G0576 Trochodendron aralioides HOM05D005680 ORTHO05D006334 8.8e-15 83.6 96 54.2
Manes.12G112300 Manihot esculenta HOM05D005680 ORTHO05D006334 1.5e-14 82.8 74 62.2
AUR62038279 Chenopodium quinoa HOM05D005680 ORTHO05D006334 1.9e-14 82.4 90 56.7
Lalb_Chr05g0226041 Lupinus albus HOM05D005680 ORTHO05D006334 1.9e-14 82.4 91 54.9
Sabra05G0114900 Salix brachista HOM05D005680 ORTHO05D006334 2.5e-14 82.0 84 59.5
Duzib147G0030 Durio zibethinus HOM05D005680 ORTHO05D006334 4.3e-14 81.3 97 54.6
TPR.G23854 Trifolium pratense HOM05D005680 ORTHO05D006334 5.7e-14 80.9 98 55.1
Aqoxy507s001 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 7.4e-14 80.5 67 62.7
Aqoxy5G00968 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 7.4e-14 80.5 67 62.7
Rhsim10G0104100 Rhododendron simsii HOM05D003166 ORTHO05D003605 7.4e-14 80.5 78 60.3
PGSC0003DMG400024942 Solanum tuberosum HOM05D005680 ORTHO05D006334 9.7e-14 80.1 88 53.4
Eucgr.H02278 Eucalyptus grandis HOM05D005680 ORTHO05D006334 1.3e-13 79.7 81 53.1
Sed0000508 Sechium edule HOM05D005680 ORTHO05D006334 1.3e-13 79.7 66 68.2
Atru.chr3.206 Acer truncatum HOM05D005680 ORTHO05D006334 1.7e-13 79.3 97 51.5
Sabra05G0116000 Salix brachista HOM05D005680 ORTHO05D006334 1.7e-13 79.3 84 58.3
Sopen02g037260 Solanum pennellii HOM05D005680 ORTHO05D006334 1.7e-13 79.3 88 52.3
Lj4g0022522 Lotus japonicus HOM05D005680 ORTHO05D006334 2.2e-13 79.0 90 54.4
CAN.G1075.10 Capsicum annuum HOM05D005680 ORTHO05D006334 2.8e-13 78.6 88 52.3
Eucgr.H02273 Eucalyptus grandis HOM05D005680 ORTHO05D006334 2.8e-13 78.6 96 49.0
Lj2g0023086 Lotus japonicus HOM05D005680 ORTHO05D006334 2.8e-13 78.6 95 51.6
Potri.005G145200 Populus trichocarpa HOM05D005680 ORTHO05D006334 2.8e-13 78.6 84 57.1
Ca_13933_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 3.7e-13 78.2 98 52.0
Nn1g04629 Nelumbo nucifera HOM05D005680 ORTHO05D006334 3.7e-13 78.2 97 49.5
Oeu013277.1 Olea europaea HOM05D005680 ORTHO05D006334 3.7e-13 78.2 87 55.2
Glyma.17G164200 Glycine max HOM05D005680 ORTHO05D006334 4.8e-13 77.8 99 52.5
Glyma.05G103100 Glycine max HOM05D005680 ORTHO05D006334 1.1e-12 76.6 89 52.8
Medtr4g095330 Medicago truncatula HOM05D005680 ORTHO05D006334 1.1e-12 76.6 81 54.3
SalBow5G4637 Salvia bowleyana HOM05D005680 ORTHO05D006334 1.4e-12 76.3 84 48.8
Nitab4.5_0007941g0020 Nicotiana tabacum HOM05D005680 ORTHO05D006334 2.4e-12 75.5 64 64.1
Potri.002G006000 Populus trichocarpa HOM05D005680 ORTHO05D006334 2.4e-12 75.5 94 48.9
Prupe.6G224700 Prunus persica HOM05D005680 ORTHO05D006334 2.4e-12 75.5 97 50.5
Phvul.003G237400 Phaseolus vulgaris HOM05D005680 ORTHO05D006334 4.1e-12 74.7 70 60.0
AL4G29360 Arabidopsis lyrata HOM05D005680 ORTHO05D006334 5.3e-12 74.3 65 56.9
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 6.9e-12 73.9 58 62.1
COL.COLO4_11529 Corchorus olitorius HOM05D005680 ORTHO05D006334 6.9e-12 73.9 69 59.4
THA.LOC104806914 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 9.1e-12 73.6 69 56.5
AT2G33690 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 1.2e-11 73.2 65 56.9
Carub.0004s1530 Capsella rubella HOM05D005680 ORTHO05D006334 1.2e-11 73.2 65 55.4
Ca_17983_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 1.2e-11 73.2 80 55.0
Sabra02G0004200 Salix brachista HOM05D005680 ORTHO05D006334 1.2e-11 73.2 98 49.0
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 1.5e-11 72.8 58 60.3
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 1.5e-11 72.8 58 60.3
CANSAT01G2162 Cannabis sativa HOM05D005680 ORTHO05D006334 1.5e-11 72.8 76 55.3
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.5e-11 72.8 65 56.9
Sc19g0003710 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.5e-11 72.8 61 63.9
Gohir.A11G217600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 2.0e-11 72.4 98 51.0
Nn1g04362 Nelumbo nucifera HOM05D005680 ORTHO05D006334 2.0e-11 72.4 74 58.1
PGR031G2681 Punica granatum HOM05D005680 ORTHO05D006334 2.0e-11 72.4 60 58.3
TPR.G11882 Trifolium pratense HOM05D005680 ORTHO05D006334 2.0e-11 72.4 78 56.4
arahy.Tifrunner.gnm1.ann1.C6RKPL Arachis hypogaea HOM05D005680 ORTHO05D006334 2.6e-11 72.0 98 48.0
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 2.6e-11 72.0 65 56.9
ClCG11G018960 Citrullus lanatus HOM05D005680 ORTHO05D006334 3.4e-11 71.6 77 57.1
Gohir.D11G205900 Gossypium hirsutum HOM05D005680 ORTHO05D006334 3.4e-11 71.6 98 49.0
Gorai.007G221000 Gossypium raimondii HOM05D005680 ORTHO05D006334 3.4e-11 71.6 98 49.0
MD02G1181800 Malus domestica HOM05D005680 ORTHO05D006334 3.4e-11 71.6 91 47.3
Nitab4.5_0003878g0080 Nicotiana tabacum HOM05D005680 ORTHO05D006334 3.4e-11 71.6 64 60.9
CARHR127690 Cardamine hirsuta HOM05D005680 ORTHO05D006334 5.9e-11 70.9 64 56.2
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 5.9e-11 70.9 58 65.5
DCAR_003112 Daucus carota HOM05D005680 ORTHO05D006334 5.9e-11 70.9 69 55.1
Sed0021632 Sechium edule HOM05D005680 ORTHO05D006334 7.7e-11 70.5 59 67.8
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 1.0e-10 70.1 68 55.9
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 1.0e-10 70.1 68 55.9
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 1.0e-10 70.1 68 55.9
MELO3C017050.2 Cucumis melo HOM05D005680 ORTHO05D006334 1.0e-10 70.1 70 58.6
QL02p015306 Quercus lobata HOM05D005680 ORTHO05D006334 1.0e-10 70.1 58 63.8
Aqoxy7G01353 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 1.7e-10 69.3 56 60.7
PSO063G6705 Papaver somniferum HOM05D005680 ORTHO05D006334 1.7e-10 69.3 89 51.7
Thecc.02G019100 Theobroma cacao HOM05D005680 ORTHO05D006334 1.7e-10 69.3 79 50.6
CsaV3_4G037560 Cucumis sativus L. HOM05D005680 ORTHO05D006334 2.9e-10 68.6 70 58.6
Nitab4.5_0000419g0130 Nicotiana tabacum HOM05D005680 ORTHO05D006334 2.9e-10 68.6 79 53.2
PGR102G2721 Punica granatum HOM05D005680 ORTHO05D006334 2.9e-10 68.6 63 58.7
TWI09G1440 Tripterygium wilfordii HOM05D005680 ORTHO05D006334 2.9e-10 68.6 102 46.1
Psat7g075160 Pisum sativum HOM05D005680 ORTHO05D006334 3.8e-10 68.2 74 54.1
Cpa.g.sc6.54 Carica papaya HOM05D005680 ORTHO05D006334 5.0e-10 67.8 73 56.2
Dinv38141 Davidia involucrata HOM05D000032 ORTHO05D004656 5.0e-10 67.8 85 51.8
arahy.Tifrunner.gnm1.ann1.Y5V9TA Arachis hypogaea HOM05D005680 ORTHO05D006334 8.5e-10 67.0 98 48.0
BcaC02g07811 Brassica carinata HOM05D005680 ORTHO05D006334 8.5e-10 67.0 68 54.4
C04p63190 Brassica napus HOM05D005680 ORTHO05D006334 8.5e-10 67.0 68 54.4
Aa31LG9G13590 Aethionema arabicum HOM05D005680 ORTHO05D006334 1.1e-09 66.6 70 48.6
HanXRQChr12g0377211 Helianthus annuus HOM05D005680 ORTHO05D006334 1.1e-09 66.6 77 46.8
Medtr8g081540 Medicago truncatula HOM05D005680 ORTHO05D006334 1.1e-09 66.6 76 56.6
COL.COLO4_17729 Corchorus olitorius HOM05D005680 ORTHO05D006334 1.4e-09 66.2 72 58.3
SalBow1G8512 Salvia bowleyana HOM05D005680 ORTHO05D006334 4.2e-09 64.7 67 56.7
Psat4g083200 Pisum sativum HOM05D005680 ORTHO05D006334 1.2e-08 63.2 99 45.5
Sc25g0001410 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.6e-08 62.8 92 47.8
CARHR114400 Cardamine hirsuta HOM05D005680 ORTHO05D006334 2.7e-08 62.0 83 48.2
Cpa.g.sc88.61 Carica papaya HOM05D005680 ORTHO05D006334 2.7e-08 62.0 66 57.6
Duzib052G1168 Durio zibethinus HOM05D005680 ORTHO05D006334 2.7e-08 62.0 78 50.0
Lalb_Chr23g0265551 Lupinus albus HOM05D005680 ORTHO05D006334 2.7e-08 62.0 59 61.0
ATR0605G143 Amborella trichopoda HOM05D005680 ORTHO05D006334 3.6e-08 61.6 80 47.5
FAN02G2432 Fragaria x ananassa HOM05D005680 ORTHO05D006334 3.6e-08 61.6 61 50.8
FAN26G2100 Fragaria x ananassa HOM05D005680 ORTHO05D006334 3.6e-08 61.6 61 50.8
MD15G1292700 Malus domestica HOM05D005680 ORTHO05D006334 3.6e-08 61.6 76 46.1
ECA246G0256 Erigeron canadensis HOM05D005680 ORTHO05D006334 6.1e-08 60.8 78 46.2
RcHm_v2.0_Chr2g0107321 Rosa chinensis HOM05D005680 ORTHO05D006334 6.1e-08 60.8 67 52.2
THA.LOC104819870 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 7.9e-08 60.5 90 44.4
SHI12592 Sapria himalayana HOM05D005680 ORTHO05D006334 1.0e-07 60.1 80 50.0
CDE04G1110 Ceratophyllum demersum HOM05D005680 ORTHO05D006334 2.3e-07 58.9 82 50.0
FAN28G2165 Fragaria x ananassa HOM05D005680 ORTHO05D006334 2.3e-07 58.9 87 43.7
Carub.0004s0232 Capsella rubella HOM05D005680 ORTHO05D006334 5.1e-07 57.8 91 40.7
Gorai.012G169600 Gossypium raimondii HOM05D005680 ORTHO05D006334 6.7e-07 57.4 63 49.2
FAN23G0577 Fragaria x ananassa HOM05D005680 ORTHO05D006334 8.8e-07 57.0 87 42.5
Gohir.D04G176700 Gossypium hirsutum HOM05D005680 ORTHO05D006334 8.8e-07 57.0 63 49.2
Cfa014129 Carpinus fangiana HOM05D005680 ORTHO05D006334 1.1e-06 56.6 58 58.6
AT2G23110 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 2.0e-06 55.8 95 42.1
Lsat_1_v5_gn_3_87720 Lactuca sativa HOM05D005680 ORTHO05D006334 2.6e-06 55.5 43 55.8
Carub.0004s0233 Capsella rubella HOM05D013772 ORTHO05D006334 3.3e-06 55.1 51 56.9
FvH4_1g17140 Fragaria vesca HOM05D005680 ORTHO05D006334 4.4e-06 54.7 87 41.4
CARHR114390 Cardamine hirsuta HOM05D013772 ORTHO05D006334 5.7e-06 54.3 74 50.0
Gohir.A04G133600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 7.4e-06 53.9 84 45.2
HPP92_012496 Vanilla planifolia HOM05D005680 ORTHO05D006334 7.4e-06 53.9 67 47.8


User provided reference genes

Program Settings