Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.2e-155 553.1 274 100.0
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 4.0e-148 528.1 275 96.4
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 3.3e-142 508.4 274 92.3
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.7e-136 488.8 274 88.0
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 5.5e-105 384.8 279 71.7
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.8e-103 379.8 281 71.9
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 6.8e-103 377.9 280 69.6
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.1e-100 370.5 280 69.3
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 3.1e-100 369.0 281 70.5
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.2e-99 367.1 279 69.5
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 7.7e-99 364.4 283 70.3
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.7e-98 363.2 281 68.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 2.3e-98 362.8 280 68.2
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 2.3e-98 362.8 280 70.7
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 3.8e-98 362.1 275 69.5
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.1e-97 360.5 285 70.9
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 7.2e-97 357.8 243 75.3
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.2e-96 357.1 282 68.1
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.1e-96 356.3 274 68.6
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 3.6e-96 355.5 278 66.5
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.1e-96 354.8 297 65.3
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 1.0e-95 354.0 276 68.5
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-95 353.2 297 65.3
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.0e-95 352.1 290 66.2
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 4.0e-95 352.1 268 70.1
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 4.0e-95 352.1 216 80.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 5.2e-95 351.7 258 69.8
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 5.2e-95 351.7 280 66.8
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 8.8e-95 350.9 280 65.0
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.2e-94 350.5 231 76.6
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.5e-94 350.1 231 75.8
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.6e-94 349.4 287 64.8
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 4.4e-94 348.6 285 65.3
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 4.4e-94 348.6 282 66.3
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 5.7e-94 348.2 287 64.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-93 347.1 297 64.6
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.8e-93 345.9 279 65.2
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.8e-92 343.2 270 67.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.8e-92 343.2 286 64.0
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 2.4e-92 342.8 308 62.0
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 4.1e-92 342.0 242 70.7
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 4.1e-92 342.0 280 63.9
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.1e-92 342.0 270 67.4
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 7.0e-92 341.3 231 73.6
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 7.0e-92 341.3 252 71.0
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 7.0e-92 341.3 280 63.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 9.2e-92 340.9 276 64.1
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 9.2e-92 340.9 281 64.8
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 9.2e-92 340.9 249 69.1
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 1.2e-91 340.5 279 63.8
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 3.5e-91 339.0 247 71.7
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 7.8e-91 337.8 280 63.9
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.7e-90 336.7 276 68.5
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.7e-90 336.7 235 74.9
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.9e-90 335.9 277 65.0
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 3.8e-90 335.5 277 66.1
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 8.6e-90 334.3 277 65.3
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.1e-89 334.0 222 75.7
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.1e-89 334.0 201 81.6
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.9e-89 333.2 274 66.1
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 2.5e-89 332.8 285 62.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 4.3e-89 332.0 231 71.4
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.3e-89 331.3 281 62.6
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 7.3e-89 331.3 237 70.5
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.2e-88 330.5 286 62.2
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 8.0e-88 327.8 280 62.5
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.0e-87 327.4 266 65.8
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.4e-87 327.0 281 63.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 6.8e-87 324.7 275 62.9
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 8.9e-87 324.3 183 83.6
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 2.0e-86 323.2 279 65.2
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.4e-86 322.4 248 66.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.3e-85 320.5 199 78.9
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.7e-85 320.1 297 59.6
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.8e-84 316.6 201 77.1
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 2.4e-84 316.2 289 60.6
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.2e-84 315.8 182 83.0
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 7.0e-84 314.7 201 76.1
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.2e-83 313.9 283 62.2
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-83 313.9 283 62.2
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.2e-83 313.9 283 62.2
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.2e-83 313.9 283 62.9
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.0e-83 313.2 284 62.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 2.7e-83 312.8 276 63.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.7e-83 312.8 274 63.1
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.7e-83 312.8 235 66.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 5.9e-83 311.6 198 77.3
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 2.3e-82 309.7 188 76.1
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 3.9e-82 308.9 201 74.6
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 3.3e-81 305.8 180 81.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 5.6e-81 305.1 207 71.5
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 8.9e-79 297.7 205 73.2
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 5.8e-78 295.0 263 59.3
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 5.8e-78 295.0 208 71.6
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.0e-74 284.3 233 62.2
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-72 277.3 267 56.9
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.1e-72 276.6 166 78.9
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 2.1e-72 276.6 267 56.9
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 6.6e-66 255.0 185 64.9
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.6e-64 249.2 241 55.6
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.4e-63 246.5 185 62.7
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.1e-51 206.8 224 55.4
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.7e-51 206.5 121 81.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.9e-50 202.6 178 57.3
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.3e-45 187.6 103 81.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.8e-32 143.3 85 80.0
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.4e-28 131.0 81 76.5
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 5.7e-25 119.0 135 49.6
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.4e-23 114.4 84 63.1
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.7e-21 107.5 96 61.5
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 4.8e-16 89.4 195 32.3
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.2e-12 76.3 85 43.5
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.1e-11 73.9 212 30.2
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.3e-08 64.7 35 88.6
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 7.7e-06 55.5 48 58.3


User provided reference genes

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