Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 4.0e-78 294.7 145 100.0
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.7e-73 279.3 145 93.8
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.0e-62 241.5 149 85.2
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 4.0e-62 241.5 149 85.2
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 2.1e-47 192.6 148 72.3
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 1.2e-37 160.2 103 76.7
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 5.8e-37 157.9 146 60.3
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 5.8e-37 157.9 122 67.2
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 7.6e-37 157.5 89 86.5
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 9.9e-37 157.1 150 58.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.3e-36 156.8 143 60.8
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.3e-36 156.8 154 56.5
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.3e-36 156.8 155 57.4
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.3e-36 156.8 109 71.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.7e-36 156.4 119 68.9
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.7e-36 156.4 128 62.5
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 4.9e-36 154.8 150 56.0
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.9e-36 154.8 91 79.1
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 4.9e-36 154.8 84 86.9
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 6.4e-36 154.5 152 57.9
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 8.4e-36 154.1 82 89.0
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.1e-35 153.7 92 78.3
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.1e-35 153.7 104 73.1
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.1e-35 153.7 89 83.1
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 1.4e-35 153.3 103 70.9
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.4e-35 153.3 88 83.0
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.9e-35 152.9 103 75.7
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 2.4e-35 152.5 150 59.3
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 2.4e-35 152.5 132 62.1
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.4e-35 152.5 145 59.3
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 3.2e-35 152.1 83 85.5
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 3.2e-35 152.1 147 59.2
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 3.2e-35 152.1 98 78.6
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 4.2e-35 151.8 89 80.9
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 4.2e-35 151.8 107 71.0
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.2e-35 151.8 92 77.2
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 4.2e-35 151.8 146 57.5
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 5.4e-35 151.4 123 65.9
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 7.1e-35 151.0 122 64.8
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 7.1e-35 151.0 146 58.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 7.1e-35 151.0 91 78.0
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 9.3e-35 150.6 122 64.8
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.6e-34 149.8 83 83.1
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.6e-34 149.8 89 79.8
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.6e-34 149.8 116 64.7
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 2.1e-34 149.4 147 57.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 2.7e-34 149.1 148 58.8
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 3.5e-34 148.7 145 59.3
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 3.5e-34 148.7 127 59.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 3.5e-34 148.7 132 61.4
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 4.6e-34 148.3 89 80.9
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.6e-34 148.3 139 59.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 6.0e-34 147.9 127 59.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 7.9e-34 147.5 83 81.9
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 7.9e-34 147.5 147 57.1
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.0e-33 147.1 87 81.6
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.3e-33 146.7 91 73.6
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.3e-33 146.7 129 58.1
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.8e-33 146.4 80 85.0
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 2.3e-33 146.0 107 69.2
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 3.0e-33 145.6 94 72.3
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.0e-33 145.6 94 72.3
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 6.7e-33 144.4 91 72.5
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 8.7e-33 144.1 132 58.3
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.1e-32 143.7 98 70.4
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 1.5e-32 143.3 136 56.6
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.9e-32 142.9 93 73.1
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.9e-32 142.9 127 59.1
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 2.5e-32 142.5 91 71.4
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 2.5e-32 142.5 91 71.4
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 2.5e-32 142.5 91 71.4
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 2.5e-32 142.5 91 71.4
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 2.5e-32 142.5 100 70.0
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 3.3e-32 142.1 91 71.4
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 3.3e-32 142.1 89 74.2
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 4.3e-32 141.7 94 70.2
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 4.3e-32 141.7 94 69.1
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 5.6e-32 141.4 99 65.7
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 5.6e-32 141.4 82 78.0
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 5.6e-32 141.4 82 78.0
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 5.6e-32 141.4 82 78.0
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 5.6e-32 141.4 82 78.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 7.4e-32 141.0 99 65.7
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 9.6e-32 140.6 91 70.3
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.3e-31 140.2 75 88.0
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.3e-31 140.2 79 84.8
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 1.6e-31 139.8 82 80.5
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.6e-31 139.8 141 55.3
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 2.1e-31 139.4 114 63.2
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 4.8e-31 138.3 111 62.2
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.4e-30 136.7 80 81.2
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 4.9e-28 128.3 70 85.7
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-27 126.7 67 89.6
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 6.0e-26 121.3 101 59.4
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 7.9e-26 120.9 145 46.9
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.0e-25 119.0 124 57.3
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 5.1e-25 118.2 85 64.7
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 8.2e-23 110.9 115 53.0
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 5.3e-22 108.2 76 65.8
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 4.5e-21 105.1 75 66.7
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.4e-19 100.1 79 60.8
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.5e-19 99.4 53 86.8
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.5e-16 90.1 114 49.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 2.6e-13 79.3 63 66.7
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.0e-12 77.4 52 69.2


User provided reference genes

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