Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 9.0e-44 179.9 91 100.0
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.2e-35 152.9 89 87.6
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.8e-31 139.0 89 77.5
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.8e-31 139.0 89 77.5
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.8e-31 139.0 89 77.5
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.8e-31 139.0 89 77.5
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.8e-31 139.0 89 76.4
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 2.3e-31 138.7 89 77.5
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 2.3e-31 138.7 89 77.5
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 3.0e-31 138.3 89 77.5
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 3.0e-31 138.3 89 77.5
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 3.0e-31 138.3 89 77.5
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.9e-31 137.9 89 77.5
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 6.7e-31 137.1 89 77.5
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 6.7e-31 137.1 89 77.5
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 6.7e-31 137.1 89 76.4
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 6.7e-31 137.1 89 77.5
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 6.7e-31 137.1 89 76.4
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 8.7e-31 136.7 89 76.4
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.1e-30 136.3 89 76.4
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 76.4
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 76.4
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 77.5
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 76.4
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 76.4
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.5e-30 136.0 89 75.3
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.9e-30 135.6 89 76.4
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.9e-30 135.6 89 76.4
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.5e-30 135.2 89 77.5
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 2.5e-30 135.2 89 77.5
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 2.5e-30 135.2 89 76.4
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 2.5e-30 135.2 89 75.3
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 3.3e-30 134.8 88 75.0
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 3.3e-30 134.8 89 75.3
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 3.3e-30 134.8 89 75.3
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 3.3e-30 134.8 89 76.4
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 4.3e-30 134.4 89 75.3
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.3e-30 134.4 89 75.3
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 4.3e-30 134.4 89 76.4
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 4.3e-30 134.4 89 76.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.6e-30 134.0 89 74.2
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 5.6e-30 134.0 89 75.3
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 5.6e-30 134.0 89 75.3
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 7.4e-30 133.7 89 76.4
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 7.4e-30 133.7 89 75.3
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 7.4e-30 133.7 89 76.4
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 7.4e-30 133.7 89 73.0
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 74.2
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 74.2
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 74.2
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 74.2
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 74.2
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 75.3
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 9.6e-30 133.3 89 75.3
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 74.2
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 75.3
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 75.3
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 75.3
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 75.3
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 74.2
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.3e-29 132.9 89 74.2
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.6e-29 132.5 89 74.2
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 1.6e-29 132.5 89 75.3
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.6e-29 132.5 89 74.2
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.6e-29 132.5 89 74.2
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.8e-29 131.7 89 71.9
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 2.8e-29 131.7 89 73.0
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 2.8e-29 131.7 89 73.0
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 2.8e-29 131.7 89 75.3
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.8e-29 131.7 89 74.2
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 73.0
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 74.2
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 74.2
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 74.2
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 74.2
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 74.2
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 71.9
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 4.8e-29 131.0 89 71.9
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 6.2e-29 130.6 89 73.0
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 8.2e-29 130.2 89 70.8
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.1e-28 129.8 89 71.9
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.4e-28 129.4 89 73.0
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.4e-28 129.4 89 71.9
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.8e-28 129.0 89 74.2
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.8e-28 129.0 89 74.2
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 2.4e-28 128.6 89 73.0
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 3.1e-28 128.3 89 70.8
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 3.1e-28 128.3 89 68.5
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 4.0e-28 127.9 89 73.0
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 4.0e-28 127.9 89 71.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 4.0e-28 127.9 89 71.9
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 4.0e-28 127.9 89 71.9
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 5.3e-28 127.5 89 71.9
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 9.0e-28 126.7 89 73.0
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.2e-27 126.3 89 71.9
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.5e-27 125.9 89 70.8
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 5.8e-27 124.0 89 70.8
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 5.8e-27 124.0 89 68.5
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.7e-26 122.5 89 68.5
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 2.9e-26 121.7 89 68.5
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.9e-26 121.7 89 67.4
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 3.8e-26 121.3 89 69.7
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 6.5e-26 120.6 89 68.5
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 8.4e-26 120.2 89 67.4
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.9e-25 119.0 89 66.3
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 4.2e-25 117.9 89 66.3
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 9.3e-25 116.7 89 66.3
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.6e-24 115.9 86 66.3
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 3.5e-24 114.8 111 55.9
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-23 112.8 89 60.7
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.3e-23 112.8 89 60.7
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.9e-23 111.3 89 61.8
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 8.7e-23 110.2 89 64.0
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 8.7e-23 110.2 92 65.2
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.5e-22 109.4 89 67.4
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.5e-22 108.6 89 62.9
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 2.5e-22 108.6 147 45.6
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 7.4e-22 107.1 114 54.4
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 6.3e-21 104.0 89 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.4e-20 102.8 89 57.3
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 1.8e-20 102.4 89 55.1
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.2e-17 91.7 72 66.7
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.6e-16 89.4 58 77.6
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 7.9e-16 87.0 60 71.7
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 1.4e-15 86.3 58 74.1
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 1.1e-14 83.2 89 52.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 1.5e-14 82.8 90 54.4
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.2e-13 79.0 58 67.2
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 2.6e-11 72.0 91 44.0
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 4.7e-08 61.2 91 38.5
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 55.5 36 75.0
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 7.4e-06 53.9 91 35.2


User provided reference genes

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