Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 1.8e-141 506.1 303 100.0
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 7.0e-109 397.9 303 74.9
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 1.6e-108 396.7 309 83.5
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 3.0e-59 233.0 302 54.3
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.5e-50 204.1 303 57.1
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.0e-22 111.7 318 33.3
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 3.6e-20 103.2 328 33.5
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.3e-17 94.7 305 33.8
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.2e-17 94.0 305 34.4
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 4.8e-17 92.8 294 33.7
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 6.9e-16 89.0 320 38.8
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 9.1e-16 88.6 307 34.2
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 4.5e-15 86.3 322 36.3
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 3.2e-13 80.1 204 34.8
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 2.7e-12 77.0 322 33.9
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.0e-11 75.1 313 31.3
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.8e-11 74.3 104 44.2
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.0e-11 73.6 293 28.3
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.0e-11 73.6 332 27.1
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 3.9e-11 73.2 338 35.2
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.9e-11 73.2 317 32.8
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.9e-11 73.2 317 32.8
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 5.1e-11 72.8 104 49.0
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 5.1e-11 72.8 307 32.2
AL1G42030 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 6.7e-11 72.4 336 28.6
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 6.7e-11 72.4 96 44.8
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.1e-10 71.6 313 31.0
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 5.7e-10 69.3 336 28.6
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 5.7e-10 69.3 314 34.7
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 7.4e-10 68.9 313 28.8
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 7.4e-10 68.9 313 28.8
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 9.7e-10 68.6 274 31.8
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 9.7e-10 68.6 301 28.9
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 9.7e-10 68.6 188 36.7
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 1.3e-09 68.2 322 28.9
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 1.7e-09 67.8 314 29.0
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.7e-09 67.8 259 30.1
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.7e-09 67.8 265 30.6
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.7e-09 67.8 308 31.5
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 1.7e-09 67.8 105 52.4
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.8e-09 67.0 330 32.1
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 3.7e-09 66.6 318 34.0
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 6.3e-09 65.9 327 26.6
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.3e-09 65.9 105 44.8
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.3e-09 65.9 336 29.8
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 6.3e-09 65.9 333 32.7
AT1G28400 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 8.2e-09 65.5 334 31.1
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 1.1e-08 65.1 323 29.4
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 1.1e-08 65.1 322 28.9
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.1e-08 65.1 344 30.2
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-08 65.1 105 44.8
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.1e-08 65.1 103 41.7
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.1e-08 65.1 332 34.6
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.1e-08 65.1 332 34.6
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.1e-08 65.1 311 28.0
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.4e-08 64.7 316 30.4
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.1e-08 63.2 106 45.3
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.0e-08 62.4 105 38.1
AL4G29650 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 9.1e-08 62.0 305 31.5
AT2G33850 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 9.1e-08 62.0 315 27.3
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 9.1e-08 62.0 308 28.6
Sp1g24680 Schrenkiella parvula HOM05D009159 ORTHO05D005331 9.1e-08 62.0 305 28.5
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.2e-07 61.6 289 32.9
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.5e-07 61.2 325 27.7
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.0e-07 60.8 287 32.1
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.0e-07 60.8 302 26.2
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.6e-07 60.5 202 36.1
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 2.6e-07 60.5 287 31.7
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.4e-07 60.1 346 32.7
BcaB07g32463 Brassica carinata HOM05D009159 ORTHO05D005331 4.5e-07 59.7 327 27.8
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 4.5e-07 59.7 310 34.8
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.5e-07 59.7 106 41.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.5e-07 59.7 346 32.7
BcaB03g13928 Brassica carinata HOM05D009159 ORTHO05D005331 5.9e-07 59.3 317 28.1
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 5.9e-07 59.3 303 33.0
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 5.9e-07 59.3 329 33.1
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 7.7e-07 58.9 312 28.8
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 7.7e-07 58.9 202 38.1
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.7e-07 58.9 202 38.1
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-06 58.5 97 43.3
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.0e-06 58.5 379 25.9
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.3e-06 58.2 109 43.1
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.3e-06 58.2 324 29.6
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.7e-06 57.8 343 35.0
Carub.0001s2688 Capsella rubella HOM05D009159 ORTHO05D005331 2.9e-06 57.0 347 32.0
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.9e-06 57.0 332 32.5
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 2.9e-06 57.0 370 23.0
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 3.8e-06 56.6 89 46.1
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 3.8e-06 56.6 323 28.8
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 3.8e-06 56.6 348 31.3
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 8.5e-06 55.5 106 37.7
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.5e-06 55.5 89 41.6


User provided reference genes

Program Settings