Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 3.0e-105 385.2 194 100.0
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 5.9e-93 344.4 196 90.3
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 5.7e-80 301.2 195 81.0
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 2.5e-75 285.8 151 95.4
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 3.2e-67 258.8 202 69.3
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 6.1e-66 254.6 156 82.7
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.4e-65 253.4 155 84.5
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.3e-65 252.7 156 82.7
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 2.3e-65 252.7 191 74.3
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.0e-65 252.3 201 67.7
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 5.2e-65 251.5 176 77.8
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 6.8e-65 251.1 156 82.1
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 8.8e-65 250.8 155 83.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 2.6e-64 249.2 155 81.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 2.6e-64 249.2 191 73.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.6e-64 249.2 175 74.3
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 9.8e-64 247.3 202 70.3
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.3e-63 246.9 194 68.6
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 2.2e-63 246.1 153 81.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 3.7e-63 245.4 184 72.8
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.8e-63 245.0 192 70.3
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 4.8e-63 245.0 196 69.9
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 6.3e-63 244.6 158 79.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 8.3e-63 244.2 196 67.9
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 8.3e-63 244.2 199 69.8
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 8.3e-63 244.2 193 70.5
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.1e-62 243.8 203 66.0
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.4e-62 243.4 190 72.6
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.4e-62 242.7 203 65.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.1e-62 242.3 198 65.2
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 3.1e-62 242.3 203 70.4
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 4.1e-62 241.9 195 69.7
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 5.4e-62 241.5 133 90.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.6e-61 240.0 197 67.5
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.6e-61 240.0 202 66.3
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.0e-61 239.6 203 66.5
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 2.0e-61 239.6 197 70.1
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.7e-61 239.2 140 87.9
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 2.7e-61 239.2 154 79.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.5e-61 238.8 157 77.1
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 5.9e-61 238.0 198 67.7
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.9e-61 238.0 180 72.8
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 7.7e-61 237.7 205 67.8
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.0e-60 237.3 180 69.4
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.7e-60 236.5 154 81.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.7e-60 236.5 205 67.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.9e-60 235.7 202 64.9
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 3.8e-60 235.3 154 77.3
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 3.8e-60 235.3 201 63.7
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 3.8e-60 235.3 173 70.5
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.5e-59 233.4 135 85.9
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.5e-59 233.4 170 72.9
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 1.9e-59 233.0 153 77.1
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.9e-59 233.0 120 95.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 2.5e-59 232.6 195 65.1
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.2e-59 231.9 122 93.4
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 5.5e-59 231.5 170 71.2
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 5.5e-59 231.5 170 71.2
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 5.5e-59 231.5 137 84.7
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 7.2e-59 231.1 124 90.3
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 7.2e-59 231.1 200 64.5
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 9.4e-59 230.7 122 92.6
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 9.4e-59 230.7 196 67.3
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.2e-58 230.3 198 63.6
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.2e-58 230.3 142 81.7
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.6e-58 229.9 122 93.4
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 2.1e-58 229.6 170 72.9
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 3.6e-58 228.8 122 89.3
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 4.7e-58 228.4 122 91.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 8.0e-58 227.6 200 63.5
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 8.0e-58 227.6 161 74.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 8.0e-58 227.6 168 72.6
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.0e-57 227.3 176 65.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 3.0e-57 225.7 148 78.4
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 4.0e-57 225.3 122 87.7
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 5.2e-57 224.9 163 71.8
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 6.8e-57 224.6 122 89.3
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 8.8e-57 224.2 122 86.9
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 8.8e-57 224.2 192 66.1
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.5e-56 223.4 122 88.5
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 142 78.9
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 7.5e-56 221.1 124 85.5
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 9.8e-56 220.7 152 75.0
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 9.8e-56 220.7 142 78.2
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 136 80.9
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 2.8e-55 219.2 234 55.1
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.8e-55 219.2 122 86.9
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 3.7e-55 218.8 122 86.9
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.1e-54 215.7 165 68.5
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.5e-53 212.2 122 85.2
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.7e-52 209.9 199 61.8
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.5e-51 206.8 160 63.8
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.9e-51 206.5 121 78.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 3.3e-51 205.7 122 80.3
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 9.5e-51 204.1 190 62.6
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 8.0e-50 201.1 214 54.7
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.8e-49 199.9 127 76.4
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 5.7e-48 194.9 158 65.2
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 1.7e-47 193.4 138 67.4
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 4.9e-47 191.8 99 96.0
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 3.5e-45 185.7 122 73.0
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.3e-43 178.7 129 65.1
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 7.3e-43 177.9 122 69.7
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.6e-42 176.8 122 68.9
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 8.3e-39 164.5 106 74.5
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 5.0e-36 155.2 144 63.2
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.2e-34 150.6 152 57.9
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.8e-33 146.7 109 70.6
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.5e-27 127.1 81 79.0
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 7.3e-27 124.8 121 53.7
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 4.4e-24 115.5 67 85.1
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 4.1e-22 109.0 153 49.0
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 2.1e-21 106.7 121 47.1
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.3e-20 103.2 71 70.4
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.6e-16 88.2 106 52.8
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.6e-16 88.2 106 52.8
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 7.6e-16 88.2 45 91.1
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.8e-15 85.9 96 54.2
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.9e-15 85.5 50 84.0
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 3.2e-14 82.8 114 46.5
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.3e-12 77.4 37 94.6
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.8e-08 62.0 42 64.3
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.1e-06 57.8 52 57.7


User provided reference genes

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