Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 7.8e-82 307.0 145 100.0
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 7.8e-58 227.3 108 97.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.3e-57 226.5 107 97.2
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 9.6e-48 193.7 103 81.6
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 2.8e-47 192.2 103 78.6
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 4.7e-47 191.4 103 79.6
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 6.2e-47 191.0 103 78.6
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 8.1e-47 190.7 103 79.6
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.4e-46 189.9 103 78.6
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 3.1e-46 188.7 101 79.2
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 4.0e-46 188.3 103 76.7
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 5.2e-46 188.0 103 77.7
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 6.9e-46 187.6 103 76.7
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 6.9e-46 187.6 103 76.7
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 6.9e-46 187.6 103 77.7
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 9.0e-46 187.2 102 78.4
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 9.0e-46 187.2 103 76.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 9.0e-46 187.2 103 75.7
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 9.0e-46 187.2 103 76.7
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 9.0e-46 187.2 103 76.7
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 9.0e-46 187.2 103 77.7
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.5e-45 186.4 103 77.7
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.5e-45 186.4 103 76.7
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.5e-45 186.4 103 75.7
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.5e-45 186.4 103 75.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 2.0e-45 186.0 103 75.7
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 2.6e-45 185.7 101 77.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 2.6e-45 185.7 103 76.7
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 2.6e-45 185.7 103 75.7
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.6e-45 185.7 103 75.7
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 3.4e-45 185.3 103 76.7
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 3.4e-45 185.3 102 78.4
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 4.4e-45 184.9 103 76.7
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.8e-45 184.5 102 76.5
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 5.8e-45 184.5 98 80.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 5.8e-45 184.5 103 77.7
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 7.6e-45 184.1 103 77.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 2.9e-44 182.2 113 73.5
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 2.9e-44 182.2 103 74.8
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.9e-44 182.2 103 75.7
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 6.4e-44 181.0 103 73.8
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 6.4e-44 181.0 101 77.2
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 6.4e-44 181.0 100 77.0
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 6.4e-44 181.0 103 75.7
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.1e-43 180.3 102 73.5
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.1e-43 180.3 103 74.8
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.4e-43 179.9 103 74.8
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.4e-43 179.9 103 70.9
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.4e-43 179.9 102 75.5
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 3.2e-43 178.7 103 73.8
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 3.2e-43 178.7 102 72.5
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 4.2e-43 178.3 103 72.8
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 5.4e-43 177.9 108 67.6
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 5.4e-43 177.9 101 75.2
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 5.4e-43 177.9 92 82.6
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 9.3e-43 177.2 101 72.3
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 9.3e-43 177.2 102 72.5
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 9.3e-43 177.2 102 70.6
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.2e-42 176.8 101 75.2
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.6e-42 176.4 102 70.6
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.6e-42 176.4 140 57.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.6e-42 176.4 102 71.6
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.6e-42 176.4 102 72.5
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.6e-42 176.4 102 72.5
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.1e-42 176.0 100 76.0
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.1e-42 176.0 102 71.6
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 3.5e-42 175.3 103 70.9
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.5e-42 175.3 102 73.5
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 6.0e-42 174.5 101 70.3
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 6.0e-42 174.5 102 69.6
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 1.7e-41 172.9 100 72.0
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 3.0e-41 172.2 126 63.5
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 5.1e-41 171.4 136 58.1
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 8.7e-41 170.6 130 60.8
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.1e-40 170.2 102 73.5
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.9e-40 169.5 106 68.9
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.3e-40 168.7 99 72.7
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 3.3e-40 168.7 136 57.4
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 3.3e-40 168.7 101 70.3
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 4.3e-40 168.3 101 68.3
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 5.6e-40 167.9 101 72.3
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 9.6e-40 167.2 97 75.3
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 2.1e-39 166.0 138 56.5
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 4.8e-39 164.9 99 72.7
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 1.8e-38 162.9 101 69.3
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.4e-35 152.5 126 57.1
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 3.2e-35 152.1 87 74.7
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 9.3e-35 150.6 83 77.1
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.2e-34 150.2 94 66.0
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.2e-34 150.2 99 68.7
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.6e-34 149.8 129 53.5
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 5.6e-32 141.4 94 62.8
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.3e-31 140.2 98 60.2
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.6e-31 139.8 103 59.2
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.8e-25 119.8 89 56.2
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 5.6e-24 114.8 139 47.5
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 5.6e-24 114.8 89 52.8
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 9.6e-24 114.0 56 85.7
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 3.7e-23 112.1 69 68.1
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.4e-22 109.4 65 75.4
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 9.0e-22 107.5 102 51.0
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.5e-21 106.7 69 68.1
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 5.8e-21 104.8 102 48.0
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 4.9e-20 101.7 90 51.1
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 7.4e-16 87.8 54 70.4


User provided reference genes

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