Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 3.7e-73 278.1 139 100.0
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 3.1e-43 178.7 92 95.7
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 9.2e-40 167.2 90 88.9
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 1.2e-39 166.8 92 87.0
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 2.0e-39 166.0 91 86.8
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 2.7e-39 165.6 122 70.5
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 7.8e-39 164.1 92 84.8
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.0e-38 163.7 92 85.9
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 1.3e-38 163.3 92 84.8
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 1.7e-38 162.9 92 83.7
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 3.0e-38 162.2 92 83.7
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 3.0e-38 162.2 92 83.7
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 3.0e-38 162.2 92 83.7
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 3.0e-38 162.2 90 84.4
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 5.0e-38 161.4 92 85.9
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.1e-37 160.2 92 82.6
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.1e-37 160.2 92 81.5
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.5e-37 159.8 92 83.7
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.9e-37 159.5 92 83.7
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.9e-37 159.5 92 81.5
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 1.9e-37 159.5 90 85.6
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 2.5e-37 159.1 92 82.6
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 2.5e-37 159.1 92 81.5
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-37 158.7 90 82.2
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-37 158.7 90 82.2
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 3.3e-37 158.7 90 82.2
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 4.3e-37 158.3 90 83.3
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.6e-37 157.9 92 82.6
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 5.6e-37 157.9 92 81.5
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 5.6e-37 157.9 90 81.1
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 7.3e-37 157.5 86 84.9
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 1.2e-36 156.8 90 82.2
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 1.2e-36 156.8 93 78.5
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 1.2e-36 156.8 93 78.5
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 1.2e-36 156.8 88 83.0
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 1.2e-36 156.8 92 81.5
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 1.2e-36 156.8 90 82.2
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.6e-36 156.4 99 74.7
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 2.1e-36 156.0 92 81.5
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.8e-36 155.6 92 80.4
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.8e-36 155.6 92 80.4
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 2.8e-36 155.6 90 81.1
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 3.6e-36 155.2 90 76.7
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 4.7e-36 154.8 90 81.1
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 6.2e-36 154.5 92 79.3
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 6.2e-36 154.5 90 78.9
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 6.2e-36 154.5 92 79.3
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 8.1e-36 154.1 92 77.2
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 8.1e-36 154.1 92 79.3
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 8.1e-36 154.1 92 79.3
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.1e-35 153.7 92 80.4
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 1.1e-35 153.7 89 80.9
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 1.1e-35 153.7 92 78.3
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.1e-35 153.7 92 78.3
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.4e-35 153.3 92 81.5
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.4e-35 153.3 92 79.3
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 2.3e-35 152.5 88 80.7
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 3.1e-35 152.1 92 78.3
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 3.1e-35 152.1 90 77.8
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 5.2e-35 151.4 90 81.1
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 5.2e-35 151.4 90 81.1
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 6.8e-35 151.0 87 81.6
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 8.9e-35 150.6 92 78.3
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 8.9e-35 150.6 92 78.3
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 8.9e-35 150.6 92 78.3
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 8.9e-35 150.6 92 77.2
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 8.9e-35 150.6 92 78.3
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 1.2e-34 150.2 90 78.9
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.2e-34 150.2 88 79.5
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.5e-34 149.8 93 73.1
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 2.0e-34 149.4 90 77.8
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.6e-34 149.1 91 76.9
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.6e-34 149.1 91 76.9
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 3.4e-34 148.7 98 72.4
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 3.4e-34 148.7 88 79.5
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 76.1
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 76.1
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 76.1
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 76.1
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.8e-34 147.9 84 81.0
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 76.1
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 5.8e-34 147.9 92 72.8
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 1.3e-33 146.7 92 75.0
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.7e-33 146.4 84 79.8
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 2.2e-33 146.0 92 75.0
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 2.2e-33 146.0 92 75.0
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 2.2e-33 146.0 92 75.0
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.9e-33 145.6 92 75.0
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.9e-33 145.6 92 75.0
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.9e-33 145.6 92 75.0
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 6.4e-33 144.4 89 77.5
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 1.9e-32 142.9 93 75.3
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 5.4e-32 141.4 82 82.9
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 9.2e-32 140.6 92 72.8
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 9.2e-32 140.6 92 72.8
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 1.2e-31 140.2 92 75.0
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 1.2e-31 140.2 92 75.0
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.6e-31 139.8 90 75.6
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 2.1e-31 139.4 135 57.0
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 3.5e-31 138.7 92 72.8
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 6.6e-30 134.4 144 54.9
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 7.3e-29 131.0 119 57.1
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.6e-28 129.8 120 56.7
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 2.1e-28 129.4 92 70.7
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 8.1e-28 127.5 110 61.8
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 5.2e-27 124.8 73 79.5
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 6.8e-27 124.4 66 87.9
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 2.6e-26 122.5 66 84.8
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 3.7e-25 118.6 66 84.8
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.1e-24 117.1 91 65.9
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.6e-23 113.2 118 55.9
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 1.3e-22 110.2 61 82.0
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 3.0e-22 109.0 65 76.9
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 3.4e-18 95.5 89 58.4
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 5.8e-18 94.7 96 52.1
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 1.4e-16 90.1 58 70.7
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 1.9e-16 89.7 95 52.6
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 1.2e-15 87.0 83 47.0
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 6.0e-15 84.7 66 69.7
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 2.3e-14 82.8 71 54.9
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 5.1e-14 81.6 90 44.4
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.1e-13 80.5 56 73.2
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 5.6e-13 78.2 107 44.9
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 4.8e-12 75.1 62 64.5
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 1.4e-11 73.6 62 61.3
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 4.9e-09 65.1 64 54.7
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 3.2e-08 62.4 67 46.3
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.7e-06 56.6 46 60.9
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 3.9e-06 55.5 68 39.7
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 6.6e-06 54.7 137 38.7


User provided reference genes

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