Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 4.1e-133 478.0 234 100.0
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.1e-117 426.8 234 90.6
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 1.3e-115 419.9 234 88.9
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 2.4e-109 399.1 219 90.4
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.9e-101 372.9 232 78.4
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 4.1e-101 371.7 229 80.3
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 5.4e-101 371.3 234 78.6
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 9.2e-101 370.5 232 79.3
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 2.7e-100 369.0 234 78.2
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.7e-100 369.0 230 79.1
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.0e-99 367.1 232 78.0
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.7e-99 366.3 228 80.3
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.3e-99 365.9 234 75.6
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 3.0e-99 365.5 234 76.5
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 3.0e-99 365.5 220 83.6
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 5.1e-99 364.8 234 78.2
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 6.6e-99 364.4 228 78.1
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 8.6e-99 364.0 234 76.1
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.1e-98 363.6 228 77.6
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.9e-98 362.8 227 77.5
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.9e-98 362.8 234 75.6
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.6e-98 361.3 234 75.6
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 5.6e-98 361.3 235 76.2
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 9.5e-98 360.5 234 76.5
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 9.5e-98 360.5 230 78.7
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 9.5e-98 360.5 230 77.0
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 2.1e-97 359.4 234 76.1
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 2.1e-97 359.4 230 75.7
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.1e-97 359.4 230 75.7
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 4.7e-97 358.2 232 75.4
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 8.1e-97 357.5 232 77.2
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.1e-96 357.1 234 73.5
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.4e-96 356.7 227 76.7
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.4e-96 356.7 232 75.4
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 1.8e-96 356.3 231 77.9
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.3e-96 355.9 230 77.0
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 2.3e-96 355.9 230 75.2
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 4.0e-96 355.1 232 75.0
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 5.2e-96 354.8 230 74.8
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 5.2e-96 354.8 232 76.3
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 8.9e-96 354.0 232 76.3
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.5e-95 353.2 232 74.6
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 2.0e-95 352.8 232 75.9
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.0e-95 352.8 227 74.9
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 2.6e-95 352.4 230 75.7
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.6e-95 352.4 232 74.1
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 3.4e-95 352.1 232 75.4
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 3.4e-95 352.1 232 72.8
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.4e-95 351.7 232 74.1
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 4.4e-95 351.7 229 76.9
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 5.8e-95 351.3 232 74.6
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 5.8e-95 351.3 232 72.8
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 7.6e-95 350.9 232 73.7
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 2.9e-94 349.0 234 73.1
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.8e-94 348.6 227 74.4
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.4e-93 346.7 235 73.6
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.4e-93 346.7 233 73.8
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 1.9e-93 346.3 234 73.5
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 3.2e-93 345.5 237 73.8
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 5.4e-93 344.7 234 72.2
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 7.1e-93 344.4 224 75.0
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 9.2e-93 344.0 237 73.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.6e-92 343.2 234 75.6
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 2.1e-92 342.8 236 73.3
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 2.7e-92 342.4 229 74.2
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 2.7e-92 342.4 233 73.8
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 3.5e-92 342.0 235 72.8
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 7.8e-92 340.9 235 71.5
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.0e-91 340.5 227 71.8
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.7e-91 339.7 235 73.2
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.7e-91 339.7 233 73.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 1.7e-91 339.7 234 72.6
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.7e-91 339.7 235 71.1
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 6.6e-91 337.8 234 71.4
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 8.6e-91 337.4 234 71.4
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 1.1e-90 337.0 234 71.4
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 1.1e-90 337.0 234 71.4
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.1e-90 337.0 227 72.2
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-90 336.3 234 71.4
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-90 336.3 234 71.4
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 2.5e-90 335.9 237 71.7
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 9.6e-90 334.0 228 70.2
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 1.4e-88 330.1 232 70.3
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.8e-88 329.7 224 71.4
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.5e-87 326.6 227 71.4
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.5e-87 326.6 227 71.4
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 7.1e-85 317.8 229 70.7
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.6e-84 316.6 216 72.7
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 7.8e-84 314.3 228 70.6
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 5.1e-83 311.6 227 67.8
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 2.5e-82 309.3 237 67.9
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 4.5e-79 298.5 231 64.5
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 4.5e-79 298.5 222 64.9
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 9.9e-79 297.4 232 64.7
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 4.2e-77 292.0 231 63.6
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 9.3e-77 290.8 210 70.5
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 4.6e-76 288.5 230 65.2
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 6.7e-75 284.6 234 64.1
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 1.3e-73 280.4 207 69.6
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 6.9e-72 274.6 199 64.8
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 4.5e-71 271.9 221 59.3
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.1e-69 267.3 214 62.6
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.3e-66 255.4 278 52.2
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.3e-66 255.4 224 56.7
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 2.1e-65 253.1 164 75.0
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 2.0e-63 246.5 159 75.5
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 2.6e-63 246.1 165 74.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 4.9e-62 241.9 162 74.7
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 6.9e-56 221.5 162 67.3
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 1.4e-53 213.8 195 52.3
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 6.9e-48 194.9 207 46.4
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.0e-46 188.7 103 85.4
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 8.8e-35 151.4 220 42.7
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.0e-27 126.3 96 62.5
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 4.4e-26 122.5 66 84.8
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 4.5e-23 112.5 97 56.7
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 7.7e-23 111.7 87 60.9
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.0e-22 111.3 67 74.6
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 2.2e-22 110.2 100 57.0
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 4.8e-17 92.4 67 64.2
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 3.8e-14 82.8 158 36.7
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.3e-09 67.8 41 68.3
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 9.2e-08 61.6 38 71.1


User provided reference genes

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