Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 0.0e+00 1222.2 807 100.0
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 5.3e-305 1050.8 812 85.3
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 4.3e-246 855.1 843 70.1
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 8.6e-130 468.8 996 50.6
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 1.3e-21 109.4 353 31.7
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 2.3e-21 108.6 201 38.3
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 5.0e-21 107.5 200 39.0
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 3.3e-20 104.8 418 28.7
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.5e-17 95.9 449 28.5
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.3e-16 92.8 202 36.1
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.7e-16 92.4 432 27.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 8.3e-16 90.1 177 37.3
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.8e-15 89.0 530 25.3
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 4.1e-15 87.8 517 25.0
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 5.4e-15 87.4 179 36.3
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 2.7e-14 85.1 162 35.2
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 3.5e-14 84.7 171 34.5
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 7.8e-14 83.6 169 36.7
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 7.8e-14 83.6 169 36.7
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 7.8e-14 83.6 181 34.3
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.3e-13 82.8 188 33.5
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.3e-13 82.0 169 36.1
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 2.3e-13 82.0 576 26.0
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 3.9e-13 81.3 137 40.1
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.9e-13 81.3 346 28.0
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 5.0e-13 80.9 352 29.0
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 8.6e-13 80.1 412 25.7
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.6e-13 80.1 345 27.8
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.5e-12 79.3 419 27.2
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 4.3e-12 77.8 483 27.3
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 5.6e-12 77.4 188 31.4
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 9.5e-12 76.6 483 27.3
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 3.6e-11 74.7 514 24.5
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 1.0e-10 73.2 187 32.1
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.3e-10 72.0 511 26.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.9e-10 70.1 542 25.5
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.9e-10 70.1 542 25.5
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 1.2e-09 69.7 183 33.9
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 2.6e-09 68.6 344 24.4
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 4.4e-09 67.8 374 23.3
AL7G41440 Arabidopsis lyrata HOM05D011210 ORTHO05D013204 1.7e-08 65.9 144 38.9
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 2.9e-08 65.1 190 27.9
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.9e-08 64.3 183 31.1
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 8.3e-08 63.5 160 33.1
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.9e-07 62.4 543 25.2
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 3.2e-07 61.6 163 30.1
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 4.1e-07 61.2 170 28.2
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 5.4e-07 60.8 542 24.0
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 7.0e-07 60.5 166 28.9
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.6e-06 59.3 413 23.0
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 2.0e-06 58.9 911 22.4
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 4.6e-06 57.8 394 23.9
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 6.0e-06 57.4 149 30.2


User provided reference genes

Program Settings