Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 6.3e-140 500.7 249 100.0
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 2.0e-114 416.0 250 85.2
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.1e-103 379.4 246 78.5
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 7.1e-83 311.2 250 66.0
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 7.8e-82 307.8 247 63.6
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.6e-81 304.7 244 64.8
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.1e-80 303.9 249 62.7
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 5.6e-80 301.6 224 67.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 2.1e-79 299.7 248 61.7
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 4.7e-79 298.5 248 61.3
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.4e-78 297.0 248 61.3
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 9.9e-77 290.8 248 61.3
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.3e-76 290.4 251 61.0
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.3e-76 290.4 251 61.0
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.3e-76 290.4 247 61.5
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.9e-76 289.3 249 62.2
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 3.8e-76 288.9 249 60.6
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 4.9e-76 288.5 249 61.0
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.9e-75 286.6 244 60.2
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.4e-75 286.2 245 61.2
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.4e-75 286.2 247 58.7
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 2.4e-75 286.2 253 58.5
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 4.1e-75 285.4 209 67.5
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 4.1e-75 285.4 209 67.5
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 5.4e-75 285.0 248 58.5
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.2e-74 283.9 197 69.5
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 2.1e-74 283.1 252 58.7
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 2.7e-74 282.7 248 60.5
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.5e-74 282.3 208 67.8
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.7e-73 280.0 233 60.5
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.3e-73 279.6 253 59.3
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.3e-73 279.6 248 59.7
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 5.1e-73 278.5 242 57.4
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 6.6e-73 278.1 192 68.8
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 6.6e-73 278.1 245 60.4
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 8.7e-73 277.7 249 57.8
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 8.7e-73 277.7 203 68.0
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 8.7e-73 277.7 248 60.1
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.1e-72 277.3 249 59.4
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.5e-72 276.2 246 59.3
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 3.3e-72 275.8 242 56.2
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 5.6e-72 275.0 251 57.4
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 9.6e-72 274.2 242 57.0
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 9.6e-72 274.2 242 57.0
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 9.6e-72 274.2 242 57.0
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 9.6e-72 274.2 242 57.0
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 2.8e-71 272.7 242 57.0
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 2.8e-71 272.7 188 68.1
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 6.2e-71 271.6 237 57.0
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 8.1e-71 271.2 220 61.4
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 8.1e-71 271.2 242 57.0
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.1e-70 270.8 237 58.2
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.1e-70 270.8 250 57.6
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.4e-70 270.4 250 58.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 1.8e-70 270.0 191 66.5
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 4.0e-70 268.9 249 56.2
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 6.9e-70 268.1 221 61.1
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 6.9e-70 268.1 242 55.0
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 2.6e-69 266.2 200 63.5
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 3.4e-69 265.8 242 57.0
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 4.4e-69 265.4 242 57.9
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 4.4e-69 265.4 192 64.6
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 9.9e-69 264.2 248 56.9
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.3e-68 263.8 245 57.6
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 2.2e-68 263.1 243 59.3
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.8e-68 262.3 242 54.1
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 3.8e-68 262.3 212 59.9
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 6.4e-68 261.5 194 64.4
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 8.4e-68 261.2 247 54.3
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.4e-67 260.4 245 55.1
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.9e-67 260.0 242 54.1
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 2.4e-67 259.6 241 56.0
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 4.2e-67 258.8 243 53.1
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 3.0e-65 252.7 203 61.6
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 6.6e-65 251.5 191 62.3
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.9e-64 250.0 285 51.6
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 3.3e-64 249.2 240 60.4
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 2.8e-63 246.1 245 54.7
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.4e-62 243.8 248 50.4
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.4e-62 243.8 197 58.4
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 5.3e-62 241.9 216 57.4
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 7.6e-61 238.0 207 56.5
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 1.7e-60 236.9 175 64.6
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 4.2e-59 232.3 192 57.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 6.2e-55 218.4 186 55.9
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.2e-53 214.2 243 49.8
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.3e-52 210.7 151 64.9
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.1e-51 207.6 249 48.2
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.4e-51 207.2 101 91.1
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.2e-50 204.1 101 90.1
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.8e-46 190.3 117 77.8
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 2.2e-44 183.3 108 76.9
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.0e-41 174.5 191 50.3
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 3.1e-38 162.9 181 47.0
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 9.7e-32 141.4 162 47.5
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 4.2e-27 125.9 75 76.0
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 7.9e-26 121.7 175 44.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.5e-21 107.5 142 41.5
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 7.2e-19 98.6 153 40.5
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 1.4e-17 94.4 186 33.9
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 3.0e-17 93.2 154 36.4
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 7.4e-16 88.6 157 36.3
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 5.3e-14 82.4 40 87.5
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 4.2e-11 72.8 192 31.8


User provided reference genes

Program Settings