Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006458.2 Cucumis melo HOM05D001004 ORTHO05D000653 9.5e-74 280.0 136 100.0
MELO3C031607.2 Cucumis melo HOM05D001004 ORTHO05D000653 2.8e-25 119.0 64 87.5
CsaV3_3G012490 Cucumis sativus L. HOM05D001004 ORTHO05D000653 3.4e-23 112.1 61 82.0
ClCG05G004510 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.1e-18 97.1 61 70.5
Sed0019846 Sechium edule HOM05D001004 ORTHO05D000653 2.8e-17 92.4 60 68.3
MELO3C006456.2 Cucumis melo HOM05D001004 ORTHO05D000653 6.3e-17 91.3 60 66.7
MELO3C031667.2 Cucumis melo HOM05D001004 ORTHO05D000653 8.2e-17 90.9 61 63.9
Sed0000530 Sechium edule HOM05D001004 ORTHO05D000653 1.4e-16 90.1 56 69.6
MELO3C031605.2 Cucumis melo HOM05D001004 ORTHO05D000653 3.1e-16 89.0 60 65.0
Sed0008214 Sechium edule HOM05D001004 ORTHO05D000653 1.2e-15 87.0 56 67.9
CsaV3_3G012440 Cucumis sativus L. HOM05D001004 ORTHO05D000653 2.0e-15 86.3 60 61.7
MELO3C031606.2 Cucumis melo HOM05D001004 ORTHO05D000653 9.4e-13 77.4 64 62.5
CsaV3_3G012470 Cucumis sativus L. HOM05D001004 ORTHO05D000653 1.1e-10 70.5 61 54.1
CsaV3_3G012450 Cucumis sativus L. HOM05D001004 ORTHO05D000653 4.8e-09 65.1 60 51.7
PSO339G6102 Papaver somniferum HOM05D001004 ORTHO05D000653 9.1e-08 60.8 53 54.7
PSO384G3535 Papaver somniferum HOM05D001004 ORTHO05D000653 1.5e-07 60.1 53 52.8
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 2.6e-07 59.3 47 57.4
HanXRQChr01g0014551 Helianthus annuus HOM05D001004 ORTHO05D000653 3.4e-07 58.9 53 52.8
Actinidia08436 Actinidia chinensis HOM05D001004 ORTHO05D000653 1.0e-06 57.4 51 56.9
HanXRQChr01g0007271 Helianthus annuus HOM05D001004 ORTHO05D000653 1.0e-06 57.4 51 56.9
PSO384G5145 Papaver somniferum HOM05D001004 ORTHO05D000653 1.0e-06 57.4 56 50.0
Sed0002681 Sechium edule HOM05D001004 ORTHO05D000653 1.0e-06 57.4 63 46.0
EL10Ac8g18696 Beta vulgaris HOM05D001004 ORTHO05D000653 1.3e-06 57.0 58 51.7
Thecc.05G233000 Theobroma cacao HOM05D001004 ORTHO05D000653 1.7e-06 56.6 57 52.6
Actinidia08437 Actinidia chinensis HOM05D001004 ORTHO05D000653 2.2e-06 56.2 47 57.4
TPR.G31260 Trifolium pratense HOM05D001004 ORTHO05D000653 2.9e-06 55.8 62 43.5
Ciclev10006212m.g Citrus clementina HOM05D001004 ORTHO05D000653 3.8e-06 55.5 51 54.9
CsaV3_5G013360 Cucumis sativus L. HOM05D001004 ORTHO05D000653 3.8e-06 55.5 60 45.0
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 5.0e-06 55.1 51 52.9
Potri.010G075400 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.0e-06 55.1 56 46.4
Ciclev10006203m.g Citrus clementina HOM05D001004 ORTHO05D000653 8.5e-06 54.3 51 52.9
Ciclev10006211m.g Citrus clementina HOM05D001004 ORTHO05D000653 8.5e-06 54.3 51 52.9
MELO3C018349.2 Cucumis melo HOM05D001004 ORTHO05D000653 8.5e-06 54.3 64 46.9
Potri.010G075200 Populus trichocarpa HOM05D001004 ORTHO05D000653 8.5e-06 54.3 56 46.4


User provided reference genes

Program Settings