Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 5.9e-266 920.2 444 100.0
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.8e-239 831.6 444 91.9
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 9.0e-222 773.5 441 85.9
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.1e-190 670.2 421 80.0
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 5.7e-176 621.3 430 70.0
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 2.0e-173 612.8 432 69.4
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.4e-171 606.7 446 67.7
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.6e-170 603.2 442 66.3
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.4e-166 590.1 441 65.3
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 3.1e-166 589.0 444 66.7
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.6e-165 586.6 431 66.6
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 3.5e-165 585.5 446 64.6
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.3e-164 583.6 443 65.9
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.7e-164 583.2 449 63.7
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 9.4e-163 577.4 438 64.2
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 3.6e-162 575.5 445 65.4
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 3.6e-162 575.5 434 65.0
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 6.1e-162 574.7 445 63.1
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 4.0e-161 572.0 447 63.3
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 8.8e-161 570.9 431 65.2
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 1.5e-160 570.1 448 62.5
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 7.5e-160 567.8 449 62.4
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 6.3e-159 564.7 446 64.6
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.8e-158 563.1 409 67.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.8e-158 563.1 448 60.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.4e-158 562.8 442 64.9
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 2.0e-157 559.7 447 61.7
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.7e-157 559.3 444 60.8
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 3.5e-157 558.9 433 62.6
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.5e-157 558.9 449 62.1
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 3.5e-157 558.9 447 63.5
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 3.5e-157 558.9 447 63.5
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 4.5e-157 558.5 444 63.1
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.5e-156 554.3 437 60.4
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 8.5e-156 554.3 448 62.5
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 7.2e-155 551.2 441 62.6
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.6e-154 550.1 426 61.0
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.1e-154 549.7 426 61.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 2.1e-154 549.7 434 62.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 5.2e-153 545.0 447 58.8
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 6.8e-153 544.7 434 62.4
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.5e-152 543.5 431 61.9
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 5.4e-150 535.0 431 60.1
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.5e-149 532.3 453 60.5
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.3e-148 530.4 453 59.8
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.9e-148 529.3 518 53.7
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.1e-147 527.3 431 60.3
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.2e-146 523.9 399 63.2
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.6e-146 523.5 438 61.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.1e-146 523.1 445 60.7
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.1e-146 523.1 431 59.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.6e-146 522.3 445 57.5
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.0e-144 516.5 431 61.5
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.2e-143 513.1 445 56.4
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.7e-143 512.3 445 56.6
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 8.3e-143 511.1 445 56.6
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 3.1e-142 509.2 431 58.5
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 7.0e-142 508.1 431 58.5
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.6e-141 506.9 431 56.6
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 2.0e-141 506.5 431 58.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.1e-139 500.7 426 59.4
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 9.5e-139 497.7 404 59.9
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 9.5e-139 497.7 431 58.9
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.1e-138 496.5 426 59.2
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 4.7e-138 495.4 430 57.0
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.3e-137 493.0 369 65.9
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.0e-137 492.3 432 57.6
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 3.4e-136 489.2 431 57.1
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 8.3e-135 484.6 411 56.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.3e-132 477.2 371 62.8
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.1e-131 474.2 432 57.4
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.8e-129 466.8 434 56.0
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 5.2e-129 465.3 444 54.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 4.4e-128 462.2 439 54.7
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 6.4e-127 458.4 436 55.7
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 1.4e-126 457.2 432 55.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 2.4e-126 456.4 433 54.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.4e-126 456.4 429 54.3
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 9.2e-126 454.5 646 42.1
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 1.5e-123 447.2 433 54.7
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.5e-123 446.4 373 58.7
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 9.5e-123 444.5 421 54.4
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 9.5e-123 444.5 421 54.4
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 4.0e-121 439.1 421 53.9
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 5.2e-121 438.7 419 53.5
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 6.8e-121 438.3 431 52.7
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.2e-120 437.6 448 52.9
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 7.5e-120 434.9 421 53.4
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 7.5e-120 434.9 383 58.0
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.9e-118 430.3 453 51.2
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 5.4e-118 428.7 433 52.9
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 4.3e-115 419.1 452 50.2
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.1e-113 412.9 318 62.3
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.1e-109 400.2 433 48.3
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 2.3e-108 396.7 316 63.3
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.5e-85 319.7 285 56.1
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 2.2e-74 283.9 443 37.9
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 7.7e-72 275.4 274 52.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.1e-70 271.6 236 58.9
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 2.8e-66 256.9 472 36.7
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.5e-56 224.6 211 50.7
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 2.6e-56 223.8 212 51.9
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 2.1e-53 214.2 199 56.8
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.0e-47 195.3 213 48.8
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 9.4e-46 188.7 179 52.0
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.0e-43 181.0 137 59.9
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.0e-36 158.7 239 40.6
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.3e-34 149.1 136 55.9
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.4e-33 147.5 126 57.1
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 8.6e-31 139.0 110 62.7
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.2e-16 92.0 100 46.0
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-11 74.3 63 52.4
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 9.8e-11 72.4 96 42.7
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.3e-10 72.0 60 58.3
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 5.4e-09 66.6 173 30.1
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.6e-08 65.1 54 57.4
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.9e-06 58.2 46 56.5


User provided reference genes

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