Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.3e-191 672.9 351 100.0
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 4.8e-154 548.1 300 97.0
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 4.5e-136 488.4 280 92.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 4.3e-126 455.3 280 85.0
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.2e-112 410.6 272 77.9
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.3e-111 407.1 281 74.4
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.7e-111 406.8 281 75.8
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.7e-111 406.8 269 77.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.0e-111 406.0 267 77.9
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 7.3e-110 401.4 280 75.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.6e-109 400.2 272 75.0
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.1e-109 399.8 268 77.6
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.1e-109 399.8 275 74.2
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.1e-109 399.8 272 75.7
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.8e-109 399.4 275 75.3
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.8e-109 399.4 267 77.5
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.0e-108 395.6 278 73.7
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.2e-107 394.0 280 71.8
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.8e-107 391.7 280 71.4
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 5.8e-107 391.7 285 71.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.7e-106 390.2 274 72.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.9e-106 389.4 274 71.9
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 2.9e-106 389.4 267 73.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.9e-106 388.7 273 72.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.9e-106 388.7 273 72.2
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.4e-106 388.3 274 72.6
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.4e-106 388.3 274 72.3
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 8.4e-106 387.9 266 75.2
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.4e-105 387.1 273 72.9
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.4e-105 386.3 266 73.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 9.3e-105 384.4 278 70.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 9.3e-105 384.4 272 72.4
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-104 384.0 280 70.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.6e-104 382.1 273 71.4
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 6.0e-104 381.7 272 72.1
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.0e-104 381.7 273 70.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 6.0e-104 381.7 275 70.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 8.7e-103 377.9 270 71.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 7.3e-102 374.8 274 68.6
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.3e-101 374.0 274 69.7
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.6e-101 373.6 276 71.0
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.8e-101 372.9 283 67.1
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.8e-101 372.9 274 69.7
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.4e-100 370.5 276 71.0
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.8e-100 370.2 274 71.2
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 3.1e-100 369.4 280 68.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.0e-100 369.0 325 62.8
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 6.9e-100 368.2 272 68.4
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 6.9e-100 368.2 274 69.7
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.5e-99 367.1 274 69.0
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.0e-99 366.7 275 67.3
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.6e-99 366.3 271 71.6
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.4e-99 365.9 276 69.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.4e-99 365.9 268 72.0
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 5.8e-99 365.2 243 76.5
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 7.6e-99 364.8 271 69.0
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 9.9e-99 364.4 291 68.0
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 9.9e-99 364.4 277 69.7
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.3e-98 364.0 286 68.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.2e-98 363.2 267 70.8
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.9e-98 362.8 278 65.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.9e-98 362.8 277 66.8
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 4.9e-98 362.1 286 68.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.1e-97 360.9 271 67.9
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.4e-97 360.5 274 67.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 2.4e-97 359.8 275 68.7
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 3.2e-97 359.4 274 66.4
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 3.2e-97 359.4 271 67.9
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 3.2e-97 359.4 267 70.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 7.1e-97 358.2 290 66.9
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 9.3e-97 357.8 279 68.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.6e-96 357.1 271 67.9
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.6e-96 357.1 271 67.9
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.1e-96 356.7 276 68.5
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 4.6e-96 355.5 266 70.3
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 6.0e-96 355.1 262 70.6
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.7e-95 353.6 240 76.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 6.6e-95 351.7 268 68.7
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 5.6e-94 348.6 281 67.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.1e-93 346.7 276 66.7
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.8e-93 346.3 278 66.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 8.1e-93 344.7 287 63.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 3.1e-92 342.8 275 66.2
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 4.0e-92 342.4 270 63.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.5e-91 339.0 233 73.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.4e-90 334.7 272 65.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.9e-89 333.6 224 77.2
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 2.1e-88 330.1 294 60.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.5e-88 329.3 275 65.1
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.3e-87 327.4 267 64.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.8e-87 327.0 271 62.7
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.3e-85 320.9 240 70.0
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.4e-84 317.4 266 60.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 5.3e-84 315.5 224 71.0
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.0e-82 311.2 266 60.2
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 7.1e-81 305.1 305 55.1
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.2e-80 304.3 240 66.7
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.3e-79 300.1 232 65.9
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.7e-79 298.5 262 61.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 2.5e-78 296.6 390 45.1
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 9.6e-78 294.7 278 58.3
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 7.4e-70 268.5 274 55.5
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.1e-64 250.4 237 58.6
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 4.6e-64 249.2 260 53.5
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.0e-55 221.5 149 75.8
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.3e-54 216.5 184 65.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-49 200.7 220 52.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-48 196.4 149 66.4
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.3e-47 193.7 182 62.1
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 6.3e-45 185.7 133 66.9
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 7.0e-44 182.2 144 61.1
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 3.5e-43 179.9 217 48.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.5e-41 173.7 121 76.0
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.8e-39 167.5 138 66.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.8e-31 141.0 147 57.8
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.6e-30 137.1 213 45.1
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 5.4e-28 129.4 119 59.7
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.0e-26 125.2 132 57.6
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.6e-24 116.7 80 75.0
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-21 107.8 80 70.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.8e-20 104.4 256 32.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.1e-12 78.6 108 44.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 9.5e-09 65.5 48 62.5


User provided reference genes

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