Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 0.0e+00 1510.4 728 100.0
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 0.0e+00 1259.6 642 94.2
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 0.0e+00 1234.6 647 91.2
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 0.0e+00 1110.1 649 82.9
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 4.6e-276 954.5 596 75.3
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.3e-275 952.2 581 75.2
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 3.7e-273 944.9 576 76.6
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.1e-272 943.3 581 74.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 6.9e-272 940.6 623 72.1
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.2e-271 939.9 576 75.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 5.9e-271 937.6 636 70.1
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.0e-270 934.5 571 75.7
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 8.5e-270 933.7 649 69.8
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.1e-269 933.3 578 76.1
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 9.4e-269 930.2 574 74.9
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.7e-268 927.9 642 70.1
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 4.7e-268 927.9 621 70.5
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 6.1e-268 927.5 628 70.4
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 7.9e-268 927.2 575 75.3
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.0e-267 926.8 642 69.9
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 3.0e-267 925.2 659 69.0
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 6.7e-267 924.1 634 69.6
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.8e-267 923.7 639 69.6
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.0e-266 922.5 604 72.2
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.3e-266 921.8 576 75.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 3.3e-266 921.8 575 74.6
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 5.7e-266 921.0 575 75.5
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 9.7e-266 920.2 646 69.2
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.7e-265 919.5 573 75.2
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 4.8e-265 917.9 575 74.1
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.1e-264 916.8 656 67.7
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 1.8e-264 916.0 584 73.3
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.8e-264 916.0 641 68.6
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.4e-264 915.6 580 73.8
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 3.1e-264 915.2 580 73.8
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 5.3e-264 914.4 645 69.6
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 9.1e-264 913.7 624 69.6
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.5e-263 911.8 596 72.0
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 4.5e-263 911.4 587 73.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 4.5e-263 911.4 585 73.2
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.3e-262 909.8 577 73.5
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 6.5e-262 907.5 637 68.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 6.5e-262 907.5 634 68.3
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.1e-261 906.7 584 72.9
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.5e-261 906.4 587 71.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 9.4e-261 903.7 642 67.6
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.6e-260 902.9 592 72.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 8.0e-260 900.6 632 69.1
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.8e-259 899.4 606 70.6
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 2.3e-259 899.0 581 71.1
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.1e-258 896.7 591 71.9
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.0e-258 896.0 571 73.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 2.0e-258 896.0 692 63.2
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 4.8e-257 891.3 603 68.7
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.2e-255 886.7 603 69.8
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.6e-255 886.3 577 71.9
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.5e-253 879.8 558 72.9
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.5e-253 879.8 590 69.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.5e-253 879.0 620 67.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.5e-253 879.0 575 71.0
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.5e-253 879.0 581 71.4
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 3.0e-251 872.1 630 67.6
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 6.8e-251 870.9 630 67.6
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 8.8e-251 870.5 575 71.8
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-250 870.2 630 67.5
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 9.8e-250 867.1 630 67.3
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.1e-248 863.6 595 68.6
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-248 863.2 640 66.1
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 1.8e-248 862.8 595 70.8
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.7e-247 859.0 583 69.0
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.6e-244 849.7 617 67.4
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 1.8e-243 846.3 583 69.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.2e-242 843.6 634 66.4
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 7.7e-239 830.9 579 67.4
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 2.9e-238 828.9 576 67.4
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 2.3e-235 819.3 619 65.3
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 5.2e-235 818.1 590 67.1
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 5.7e-234 814.7 582 67.5
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 4.9e-233 811.6 632 64.4
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 2.0e-231 806.2 633 64.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 2.0e-231 806.2 633 64.3
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.5e-231 805.4 556 68.2
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 5.9e-231 804.7 623 62.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.0e-230 802.4 627 64.3
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.4e-226 788.9 631 63.1
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.3e-225 786.9 621 63.8
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 2.7e-223 779.2 626 63.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 4.6e-223 778.5 602 62.8
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 5.6e-221 771.5 617 61.1
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.4e-211 740.3 573 62.7
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 2.3e-211 739.6 623 59.9
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.5e-202 710.3 572 60.1
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.3e-190 670.6 569 57.3
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.9e-185 652.1 608 55.8
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.4e-184 649.8 522 61.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.0e-182 644.4 585 55.7
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.6e-181 638.6 576 55.6
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 4.1e-171 605.9 591 53.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 2.6e-170 603.2 635 50.4
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.5e-170 602.4 621 51.0
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 6.3e-164 582.0 370 71.1
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.0e-134 485.0 525 50.3
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.7e-121 441.0 251 80.1
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 7.3e-96 355.9 205 79.5
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 7.6e-77 292.7 212 66.5
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 5.5e-67 260.0 194 59.3
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 4.0e-62 243.8 228 57.0
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.4e-46 191.4 102 83.3
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 5.1e-41 173.7 132 59.1
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 4.0e-25 120.9 101 54.5
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 8.8e-25 119.8 76 73.7
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.7e-23 115.5 65 78.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 7.0e-22 110.2 79 64.6
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.5e-16 92.4 86 54.7
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 3.5e-13 81.3 133 39.1
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 3.8e-12 77.8 37 89.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.8e-12 77.8 39 87.2
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 3.3e-11 74.7 39 84.6


User provided reference genes

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