Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.3e-177 626.3 329 100.0
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 4.5e-146 521.5 327 87.5
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 4.6e-114 415.2 334 70.7
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 1.9e-72 276.9 306 58.5
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 4.4e-24 116.3 214 39.3
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.9e-23 113.6 339 29.8
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.9e-23 113.6 353 29.5
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.9e-23 112.8 353 29.5
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 6.4e-23 112.5 362 33.7
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 5.4e-22 109.4 246 41.1
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 7.0e-22 109.0 426 31.7
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 1.2e-21 108.2 339 36.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 3.5e-21 106.7 400 30.8
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 1.0e-20 105.1 242 43.0
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 3.0e-20 103.6 211 39.3
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 6.6e-20 102.4 361 29.6
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 8.6e-20 102.1 245 38.8
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.5e-19 101.3 245 40.4
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-19 100.9 246 38.6
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 2.5e-19 100.5 238 36.1
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 1.2e-18 98.2 245 40.0
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 4.7e-18 96.3 380 30.3
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 8.0e-18 95.5 350 28.6
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.1e-17 95.1 221 41.6
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.1e-17 95.1 207 37.7
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 1.8e-17 94.4 202 41.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 3.1e-17 93.6 370 28.9
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 4.0e-17 93.2 234 40.6
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 6.8e-17 92.4 210 40.0
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-16 91.7 166 38.0
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-16 91.3 343 27.7
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.6e-16 90.5 247 38.1
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 9.8e-16 88.6 323 32.2
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.3e-15 88.2 296 33.4
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.9e-15 86.3 335 27.8
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 4.9e-15 86.3 352 29.0
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 8.3e-15 85.5 125 52.0
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 8.3e-15 85.5 295 31.9
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 8.3e-15 85.5 134 43.3
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 1.4e-14 84.7 295 31.2
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.4e-14 84.7 183 41.0
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 1.4e-14 84.7 229 36.2
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 4.1e-14 83.2 325 29.5
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.1e-14 83.2 180 36.7
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 7.0e-14 82.4 201 42.8
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 7.0e-14 82.4 278 34.9
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 9.2e-14 82.0 204 43.1
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 9.2e-14 82.0 221 32.1
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 1.6e-13 81.3 317 30.3
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.1e-13 80.9 196 42.3
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 4.6e-13 79.7 278 34.5
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 6.0e-13 79.3 358 27.4
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 1.3e-12 78.2 142 47.9
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 1.3e-12 78.2 202 41.1
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.7e-12 77.8 193 33.2
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 1.7e-12 77.8 401 25.2
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 2.3e-12 77.4 243 31.7
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 2.3e-12 77.4 188 44.7
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 3.0e-12 77.0 289 28.7
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 3.9e-12 76.6 212 32.5
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 6.6e-12 75.9 213 32.4
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 6.6e-12 75.9 213 32.4
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 6.6e-12 75.9 213 32.4
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 6.6e-12 75.9 384 29.2
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 6.6e-12 75.9 248 31.9
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 1.1e-11 75.1 204 38.7
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 3.3e-11 73.6 229 33.2
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 9.5e-11 72.0 240 32.9
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.5e-11 72.0 187 39.6
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 1.2e-10 71.6 183 36.1
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 1.6e-10 71.2 239 33.1
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 6.2e-10 69.3 337 27.3
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 1.4e-09 68.2 171 43.3
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.4e-09 68.2 170 42.4
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.8e-09 67.8 244 32.0
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 5.2e-09 66.2 169 34.9
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 5.2e-09 66.2 270 28.1
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.2e-08 65.1 218 39.4
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.5e-08 64.7 219 39.7
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 2.0e-08 64.3 205 36.1
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 2.0e-08 64.3 354 25.4
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 2.6e-08 63.9 375 28.0
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 4.4e-08 63.2 188 38.8
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.7e-07 61.2 173 31.2
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 1.1e-06 58.5 401 23.9
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 2.4e-06 57.4 282 30.1
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 3.2e-06 57.0 170 34.1
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 5.4e-06 56.2 101 44.6
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 9.2e-06 55.5 324 25.6


User provided reference genes

Program Settings