Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 5.1e-306 1053.5 510 100.0
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.6e-294 1015.4 510 95.9
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 2.2e-280 968.4 514 92.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 4.9e-264 914.1 515 86.2
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 4.2e-231 804.7 518 76.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 3.0e-229 798.5 514 75.7
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 5.3e-226 787.7 512 75.0
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 1.2e-225 786.6 507 75.1
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 4.5e-225 784.6 470 79.1
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 5.8e-225 784.3 511 74.4
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.3e-224 783.1 501 74.7
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.7e-224 782.7 504 75.8
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 2.9e-224 781.9 451 79.8
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 4.9e-224 781.2 472 77.1
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 4.9e-224 781.2 503 75.3
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 1.4e-223 779.6 515 73.8
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.4e-223 778.9 476 77.3
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 4.2e-223 778.1 491 75.4
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 4.2e-223 778.1 503 74.4
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.6e-222 776.2 465 78.5
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.5e-222 775.0 460 78.0
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.7e-221 770.8 495 74.1
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 8.7e-221 770.4 508 73.2
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 1.5e-220 769.6 520 72.5
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.9e-220 769.2 506 73.5
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 4.3e-220 768.1 515 71.8
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 4.3e-220 768.1 450 78.9
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 9.6e-220 766.9 450 78.4
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 1.3e-219 766.5 494 73.5
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 2.1e-219 765.8 459 78.4
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 3.7e-219 765.0 451 78.0
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 6.2e-219 764.2 502 73.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.1e-218 763.5 450 78.4
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.4e-218 763.1 451 78.5
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 5.3e-218 761.1 476 75.8
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 6.9e-218 760.8 452 78.3
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 6.9e-218 760.8 515 71.8
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.2e-217 760.0 500 72.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.0e-217 759.2 517 71.4
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 2.6e-217 758.8 490 74.5
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 5.8e-217 757.7 512 71.7
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.7e-216 756.1 455 76.7
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 4.9e-216 754.6 508 72.2
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 4.9e-216 754.6 479 73.9
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 4.9e-216 754.6 502 73.3
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 6.5e-216 754.2 458 78.4
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 8.4e-216 753.8 524 69.8
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.1e-215 753.4 455 77.8
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.1e-215 753.4 514 71.8
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.1e-215 753.4 538 68.8
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.9e-215 752.7 515 72.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 2.5e-215 752.3 461 77.7
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 2.5e-215 752.3 488 74.4
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 5.5e-215 751.1 515 71.8
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 5.5e-215 751.1 544 69.5
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 7.1e-215 750.7 535 69.2
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 9.3e-215 750.4 488 74.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 9.3e-215 750.4 514 71.4
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.2e-214 750.0 462 76.8
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.2e-214 750.0 480 74.4
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.1e-214 749.2 455 75.8
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 4.6e-214 748.0 504 72.0
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 2.3e-213 745.7 515 71.8
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 3.0e-213 745.3 515 71.7
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.9e-213 745.0 503 71.6
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 8.7e-213 743.8 515 71.7
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 9.6e-212 740.3 516 70.0
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.7e-211 738.4 514 70.8
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 3.7e-211 738.4 446 76.2
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 3.7e-211 738.4 497 70.8
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 8.2e-211 737.3 520 70.8
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.3e-210 734.6 499 72.5
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 1.2e-209 733.4 506 69.6
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.4e-209 731.9 534 68.4
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.5e-209 731.5 517 68.5
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.7e-208 729.6 493 69.6
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 5.0e-208 728.0 456 74.8
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 3.2e-207 725.3 451 74.5
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 7.2e-207 724.2 525 68.0
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.6e-206 723.0 476 72.1
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.6e-206 721.8 455 74.9
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 3.0e-205 718.8 509 70.7
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 4.3e-204 714.9 451 72.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 1.3e-203 713.4 452 72.8
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.6e-203 713.0 504 67.1
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 6.3e-203 711.1 451 72.1
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 1.4e-202 709.9 453 72.0
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 1.2e-201 706.8 454 72.2
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.4e-197 693.3 451 72.7
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 1.8e-194 682.9 503 66.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 7.7e-193 677.6 470 69.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 7.9e-190 667.5 443 72.9
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 2.0e-180 636.3 449 63.7
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 5.7e-180 634.8 465 62.6
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.2e-179 632.9 526 61.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.8e-176 622.1 493 61.9
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.2e-174 617.1 446 63.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 4.7e-174 615.1 455 66.8
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.0e-173 614.0 474 62.4
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.5e-172 610.1 365 77.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.9e-168 595.9 508 59.4
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 7.5e-164 581.3 380 73.9
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.8e-163 579.3 379 72.3
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 2.4e-138 496.5 346 69.7
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.2e-134 484.2 472 54.9
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.7e-126 455.7 317 73.2
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.6e-121 440.7 468 47.2
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 4.5e-116 422.5 471 47.6
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.6e-108 396.7 308 64.9
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 5.1e-104 382.5 462 44.2
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.7e-86 323.2 451 39.9
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 1.1e-42 178.7 100 81.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.8e-41 174.1 225 40.4
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 8.9e-32 142.5 96 68.8
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 8.9e-32 142.5 96 68.8
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 8.9e-32 142.5 96 68.8
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 8.9e-32 142.5 96 68.8
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 2.1e-25 121.3 277 31.0
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 1.3e-22 112.1 70 72.9
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 2.5e-18 97.8 59 76.3
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 3.3e-10 70.9 40 80.0
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 2.1e-09 68.2 97 44.3
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.4e-08 65.5 41 82.9
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 4.0e-08 63.9 43 76.7


User provided reference genes

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