Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 1.3e-64 249.6 125 100.0
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 1.3e-61 239.6 125 96.0
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 6.1e-35 151.0 126 68.3
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 5.7e-33 144.4 204 44.1
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 2.1e-14 82.8 102 43.1
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 2.3e-13 79.3 87 46.0
Sed0008180 Sechium edule HOM05D007943 ORTHO05D010047 1.5e-12 76.6 109 41.3
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 9.5e-12 73.9 81 44.4
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 2.8e-11 72.4 75 42.7
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 3.6e-11 72.0 100 34.0
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 1.4e-10 70.1 65 50.8
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 3.1e-10 68.9 79 40.5
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 3.1e-10 68.9 79 39.2
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.0e-10 68.6 105 33.3
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 4.0e-10 68.6 105 33.3
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 5.2e-10 68.2 59 49.2
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 1.2e-09 67.0 80 38.8
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.2e-09 67.0 101 35.6
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 1.2e-09 67.0 88 39.8
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 1.5e-09 66.6 53 50.9
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 2.0e-09 66.2 80 40.0
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.6e-09 65.9 53 49.1
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 3.4e-09 65.5 87 39.1
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.4e-09 65.5 53 49.1
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.4e-09 65.5 101 36.6
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 4.4e-09 65.1 75 37.3
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 4.4e-09 65.1 83 37.3
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 4.4e-09 65.1 83 37.3
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 5.8e-09 64.7 55 50.9
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.8e-09 64.7 72 40.3
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 7.5e-09 64.3 52 48.1
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 7.5e-09 64.3 101 36.6
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.3e-08 63.5 53 47.2
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.3e-08 63.5 65 40.0
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.7e-08 63.2 100 37.0
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.9e-08 62.4 78 37.2
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 2.9e-08 62.4 101 33.7
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 2.9e-08 62.4 87 35.6
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 8.3e-08 60.8 90 36.7
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 1.1e-07 60.5 100 31.0
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 1.1e-07 60.5 97 35.1
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.4e-07 60.1 96 34.4
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 3.2e-07 58.9 81 38.3
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 4.1e-07 58.5 85 30.6
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 4.1e-07 58.5 85 34.1
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 4.1e-07 58.5 79 32.9
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 4.1e-07 58.5 48 45.8
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 9.2e-07 57.4 77 33.8
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 1.2e-06 57.0 53 45.3
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 2.1e-06 56.2 89 39.3
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 2.1e-06 56.2 76 36.8
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 4.6e-06 55.1 63 36.5
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 4.6e-06 55.1 75 36.0
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 7.8e-06 54.3 46 43.5
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 7.8e-06 54.3 81 37.0


User provided reference genes

Program Settings