Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 6.9e-54 213.8 112 100.0
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 1.2e-42 176.4 112 85.7
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 2.8e-39 165.2 112 79.5
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 3.2e-27 125.2 113 64.6
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 8.5e-12 73.9 118 44.9
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 7.2e-11 70.9 117 46.2
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 1.2e-10 70.1 117 44.4
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 2.1e-10 69.3 119 46.2
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 4.0e-09 65.1 117 39.3
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 4.0e-09 65.1 117 39.3
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 4.0e-09 65.1 117 39.3
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 6.8e-09 64.3 120 40.8
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 8.8e-09 63.9 114 37.7
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 1.2e-08 63.5 119 42.0
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 1.5e-08 63.2 120 41.7
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 2.0e-08 62.8 125 42.4
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 2.6e-08 62.4 89 43.8
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 3.4e-08 62.0 90 42.2
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 5.7e-08 61.2 116 40.5
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 7.5e-08 60.8 128 39.1
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 7.5e-08 60.8 119 37.8
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 7.5e-08 60.8 122 42.6
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 9.8e-08 60.5 34 73.5
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 1.3e-07 60.1 107 42.1
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 2.2e-07 59.3 112 42.9
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 2.2e-07 59.3 117 42.7
HPP92_020021 Vanilla planifolia HOM05D007326 ORTHO05D009048 2.8e-07 58.9 41 65.9
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 3.7e-07 58.5 90 41.1
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.7e-07 58.5 122 36.9
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 6.3e-07 57.8 30 83.3
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 8.3e-07 57.4 30 80.0
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 8.3e-07 57.4 117 38.5
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 8.3e-07 57.4 81 43.2
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.1e-06 57.0 91 47.3
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.1e-06 57.0 92 43.5
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 1.8e-06 56.2 87 41.4
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 1.8e-06 56.2 37 64.9
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 2.4e-06 55.8 26 88.5
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 2.4e-06 55.8 119 38.7
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 3.1e-06 55.5 87 40.2
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 3.1e-06 55.5 118 36.4
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 4.1e-06 55.1 88 42.0
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 4.1e-06 55.1 76 43.4
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 4.1e-06 55.1 82 41.5
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 5.4e-06 54.7 87 42.5
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 7.0e-06 54.3 35 68.6
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 7.0e-06 54.3 90 45.6
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 7.0e-06 54.3 106 39.6
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 7.0e-06 54.3 94 39.4


User provided reference genes

Program Settings