Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 4.6e-132 474.6 237 100.0
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 4.0e-128 461.5 237 96.6
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.4e-125 452.2 239 95.4
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 3.5e-124 448.4 237 93.2
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 3.1e-96 355.5 235 74.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.4e-91 340.1 236 71.6
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 5.1e-91 338.2 227 72.2
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 5.7e-90 334.7 229 70.7
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 7.4e-90 334.3 233 70.4
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 4.8e-89 331.6 209 76.6
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 6.3e-89 331.3 240 68.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 8.2e-89 330.9 201 79.1
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.4e-88 330.1 232 70.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 4.1e-88 328.6 207 76.3
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 9.1e-88 327.4 235 68.9
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.3e-86 323.6 234 69.7
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 2.2e-86 322.8 231 67.5
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 5.0e-86 321.6 230 69.1
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 6.5e-86 321.2 206 72.8
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 1.9e-85 319.7 209 72.7
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.5e-85 319.3 231 69.7
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 7.2e-85 317.8 234 67.1
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 7.9e-84 314.3 229 66.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 7.9e-84 314.3 231 65.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.9e-84 314.3 231 64.9
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.4e-83 313.5 201 74.1
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 3.0e-83 312.4 229 65.9
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 5.1e-83 311.6 199 72.9
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 6.7e-83 311.2 234 62.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.1e-82 310.5 231 68.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.3e-82 308.9 231 64.9
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.4e-82 308.5 236 64.8
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 9.7e-82 307.4 234 63.7
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.8e-81 305.8 229 66.4
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.7e-81 305.4 230 63.9
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.8e-81 305.1 201 71.6
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.4e-80 303.5 203 69.0
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 3.1e-80 302.4 231 63.6
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 3.1e-80 302.4 231 64.9
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 5.3e-80 301.6 234 64.1
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.3e-80 301.6 203 69.5
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 5.3e-80 301.6 228 65.8
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.2e-79 300.4 202 69.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.2e-79 300.4 230 65.2
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.5e-79 300.1 216 66.2
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.5e-79 300.1 237 61.6
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.5e-79 300.1 235 64.7
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.6e-79 299.3 231 63.6
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 3.5e-79 298.9 201 67.2
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 7.7e-79 297.7 198 72.2
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.2e-78 296.2 230 62.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 2.2e-78 296.2 230 62.2
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 2.9e-78 295.8 230 62.6
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.8e-78 295.4 242 61.2
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 5.0e-78 295.0 230 61.7
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 5.0e-78 295.0 203 70.0
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.1e-77 293.9 218 64.7
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.9e-77 293.1 242 60.7
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 4.2e-77 292.0 203 66.5
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 4.2e-77 292.0 203 66.5
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 4.2e-77 292.0 189 71.4
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 5.5e-77 291.6 233 61.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.4e-77 290.8 231 61.0
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.6e-76 290.0 231 62.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.6e-76 290.0 234 62.0
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.7e-76 289.3 204 70.6
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 3.6e-76 288.9 203 65.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 3.9e-75 285.4 211 63.5
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.9e-75 285.4 203 67.0
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 3.9e-75 285.4 205 67.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 5.2e-75 285.0 235 62.6
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 8.8e-75 284.3 207 66.2
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 8.8e-75 284.3 205 68.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.5e-74 283.5 198 65.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.6e-74 282.7 254 57.5
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 4.4e-74 282.0 206 67.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.3e-73 280.4 241 60.2
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.2e-73 279.6 282 53.9
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 4.8e-73 278.5 184 71.2
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 8.2e-73 277.7 199 64.8
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.1e-72 277.3 199 65.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.4e-72 276.2 202 62.9
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 4.1e-72 275.4 200 65.0
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 4.5e-71 271.9 253 58.1
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 5.9e-71 271.6 200 64.0
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 5.9e-71 271.6 201 64.7
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.5e-70 267.7 177 71.2
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 8.5e-70 267.7 296 49.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.6e-68 263.5 197 61.9
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.6e-68 263.5 198 62.6
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 2.1e-68 263.1 211 61.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.4e-67 260.4 235 58.3
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 6.8e-67 258.1 233 57.5
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 9.1e-64 247.7 202 56.9
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.9e-62 242.7 175 68.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 8.5e-62 241.1 179 62.6
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 8.5e-62 241.1 175 68.6
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.2e-60 237.3 164 69.5
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 3.7e-57 225.7 160 65.0
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 4.8e-57 225.3 201 50.2
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 5.4e-56 221.9 168 66.7
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 3.8e-54 215.7 142 74.6
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.1e-48 197.6 178 60.1
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.1e-44 183.3 162 59.3
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.1e-44 181.8 136 66.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.0e-44 181.4 133 61.7
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.5e-37 160.6 112 65.2
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 5.2e-35 152.1 106 67.0
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.8e-34 148.7 87 81.6
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.7e-33 146.0 130 60.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-28 131.0 84 75.0
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 8.1e-28 128.3 110 61.8
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.8e-27 127.1 91 68.1
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.0e-26 123.6 91 61.5
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 3.4e-26 122.9 92 69.6
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 3.9e-22 109.4 81 64.2
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-20 104.4 86 57.0
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.6e-20 104.0 87 56.3
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 2.8e-20 103.2 70 70.0
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.2e-20 102.1 78 62.8
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.4e-19 100.1 79 51.9
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 4.3e-13 79.3 67 55.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 7.3e-13 78.6 67 49.3
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 6.4e-09 65.5 52 63.5


User provided reference genes

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