Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005612.2 Cucumis melo HOM05D001263 ORTHO05D001120 3.4e-68 261.5 133 100.0
MELO3C005611.2 Cucumis melo HOM05D001263 ORTHO05D001120 2.0e-55 219.2 138 82.6
CsaV3_5G003410 Cucumis sativus L. HOM05D001263 ORTHO05D001120 4.5e-52 208.0 139 78.4
ClCG01G003340 Citrullus lanatus HOM05D001263 ORTHO05D001120 3.8e-35 151.8 138 57.2
ClCG01G003330 Citrullus lanatus HOM05D001263 ORTHO05D001120 1.5e-31 139.8 121 61.2
ClCG01G003360 Citrullus lanatus HOM05D001263 ORTHO05D001120 9.7e-31 137.1 139 51.8
CsaV3_5G003420 Cucumis sativus L. HOM05D001263 ORTHO05D001120 1.7e-27 126.3 140 50.7
MELO3C005610.2 Cucumis melo HOM05D001263 ORTHO05D001120 2.9e-27 125.6 140 51.4
ClCG01G003370 Citrullus lanatus HOM05D001263 ORTHO05D001120 8.0e-25 117.5 137 48.2
CsaV3_5G003430 Cucumis sativus L. HOM05D001263 ORTHO05D001120 4.0e-24 115.2 140 44.3
Sed0014264 Sechium edule HOM05D001263 ORTHO05D001120 8.3e-22 107.5 138 44.2
Sed0001541 Sechium edule HOM05D001263 ORTHO05D001120 1.6e-20 103.2 133 45.1
Sed0002566 Sechium edule HOM05D001263 ORTHO05D001120 3.3e-18 95.5 139 41.7
Sed0018083 Sechium edule HOM05D001263 ORTHO05D001120 2.3e-16 89.4 109 47.7
Sed0011491 Sechium edule HOM05D001263 ORTHO05D001120 1.5e-15 86.7 109 46.8
ClCG01G003350 Citrullus lanatus HOM05D001263 ORTHO05D001120 4.4e-15 85.1 96 50.0
Thecc.03G267100 Theobroma cacao HOM05D001263 ORTHO05D001120 7.0e-13 77.8 134 35.8
Dinv39039 Davidia involucrata HOM05D001263 ORTHO05D001120 2.3e-11 72.8 131 35.9
Duzib068G1182 Durio zibethinus HOM05D001263 ORTHO05D001120 3.9e-11 72.0 131 33.6
Ciclev10024422m.g Citrus clementina HOM05D001263 ORTHO05D001120 8.6e-11 70.9 115 33.9
Potri.001G113400 Populus trichocarpa HOM05D001263 ORTHO05D001120 1.1e-10 70.5 126 34.1
Actinidia27418 Actinidia chinensis HOM05D001263 ORTHO05D001120 9.5e-10 67.4 130 31.5
Duzib068G0864 Durio zibethinus HOM05D001263 ORTHO05D001120 1.2e-09 67.0 128 35.2
VMungo0720G2037 Vigna mungo HOM05D001263 ORTHO05D001120 1.2e-09 67.0 128 28.1
QL12p039031 Quercus lobata HOM05D001263 ORTHO05D001120 2.8e-09 65.9 127 27.6
CSS0004016 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 3.6e-09 65.5 112 36.6
Phvul.007G064300 Phaseolus vulgaris HOM05D001263 ORTHO05D001120 6.1e-09 64.7 128 27.3
GSVIVG01018461001 Vitis vinifera HOM05D001263 ORTHO05D001120 6.1e-09 64.7 125 32.8
Glyma.20G152900 Glycine max HOM05D001263 ORTHO05D001120 1.4e-08 63.5 134 26.9
CSS0022137 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 1.8e-08 63.2 131 31.3
COL.COLO4_28825 Corchorus olitorius HOM05D001263 ORTHO05D002559 1.8e-08 63.2 121 31.4
Thecc.03G267000 Theobroma cacao HOM05D001263 ORTHO05D001120 1.8e-08 63.2 130 32.3
Dinv28514 Davidia involucrata HOM05D001263 ORTHO05D001120 2.3e-08 62.8 131 29.0
FAN13G0672 Fragaria x ananassa HOM05D001263 ORTHO05D001120 2.3e-08 62.8 130 30.0
Eucgr.D01948 Eucalyptus grandis HOM05D001263 ORTHO05D001120 3.1e-08 62.4 115 30.4
Atru.chr1.588 Acer truncatum HOM05D001263 ORTHO05D001120 4.0e-08 62.0 137 31.4
MELO3C006854.2 Cucumis melo HOM05D001263 ORTHO05D001120 4.0e-08 62.0 133 29.3
VMungo0464G1288 Vigna mungo HOM05D001263 ORTHO05D001120 5.2e-08 61.6 127 29.1
Eucgr.E00512 Eucalyptus grandis HOM05D001263 ORTHO05D001120 6.8e-08 61.2 137 29.2
RcHm_v2.0_Chr7g0199961 Rosa chinensis HOM05D001263 ORTHO05D001120 6.8e-08 61.2 109 32.1
TWI81G0610 Tripterygium wilfordii HOM05D001263 ORTHO05D001120 6.8e-08 61.2 138 31.9
Lj5g0006047 Lotus japonicus HOM05D001263 ORTHO05D001120 8.9e-08 60.8 118 34.7
Peaxi162Scf00156g00023 Petunia axillaris HOM05D001263 ORTHO05D001120 8.9e-08 60.8 133 32.3
CsaV3_3G016560 Cucumis sativus L. HOM05D001263 ORTHO05D001120 1.2e-07 60.5 125 28.8
FAN04G0053 Fragaria x ananassa HOM05D001263 ORTHO05D001120 1.2e-07 60.5 130 28.5
TWI81G0370 Tripterygium wilfordii HOM05D001263 ORTHO05D001120 1.2e-07 60.5 136 30.1
Glyma.10G241400 Glycine max HOM05D001263 ORTHO05D001120 1.5e-07 60.1 134 25.4
AUR62021281 Chenopodium quinoa HOM05D001263 ORTHO05D001120 2.0e-07 59.7 105 27.6
FAN18G2099 Fragaria x ananassa HOM05D001263 ORTHO05D001120 2.0e-07 59.7 130 29.2
Hma1.2p1_0371F.1_g138320 Hydrangea macrophylla HOM05D001263 ORTHO05D001120 2.0e-07 59.7 132 30.3
Gorai.008G282300 Gossypium raimondii HOM05D001263 ORTHO05D001120 2.6e-07 59.3 129 32.6
MBI11_g37707_MAGBIO Magnolia biondii HOM05D001263 ORTHO05D001120 2.6e-07 59.3 130 30.8
Duzib084G1059 Durio zibethinus HOM05D001263 ORTHO05D001120 3.4e-07 58.9 127 33.9
Potri.012G132000 Populus trichocarpa HOM05D001263 ORTHO05D001120 3.4e-07 58.9 128 30.5
CiPaw.03G099000 Carya illinoinensis HOM05D001263 ORTHO05D001120 4.4e-07 58.5 106 30.2
FvH4_5g01160 Fragaria vesca HOM05D001263 ORTHO05D001120 4.4e-07 58.5 130 28.5
Prupe.2G286100 Prunus persica HOM05D001263 ORTHO05D001120 4.4e-07 58.5 136 28.7
Sabra15G0146400 Salix brachista HOM05D001263 ORTHO05D001120 4.4e-07 58.5 132 29.5
ECA232G1780 Erigeron canadensis HOM05D001263 ORTHO05D001120 5.8e-07 58.2 124 28.2
Medtr1g102370 Medicago truncatula HOM05D001263 ORTHO05D001120 5.8e-07 58.2 129 25.6
PGR042G1285 Punica granatum HOM05D001263 ORTHO05D001120 5.8e-07 58.2 113 31.9
arahy.Tifrunner.gnm1.ann1.VKT7IT Arachis hypogaea HOM05D001263 ORTHO05D001120 7.5e-07 57.8 133 28.6
PGR102G2415 Punica granatum HOM05D001263 ORTHO05D001120 7.5e-07 57.8 134 29.9
Actinidia05238 Actinidia chinensis HOM05D001263 ORTHO05D001120 9.8e-07 57.4 116 30.2
Rhsim03G0173900 Rhododendron simsii HOM05D001263 ORTHO05D001120 9.8e-07 57.4 133 25.6
TPR.G26585 Trifolium pratense HOM05D001263 ORTHO05D001120 9.8e-07 57.4 131 29.8
Dinv35131 Davidia involucrata HOM05D001263 ORTHO05D001120 1.3e-06 57.0 105 32.4
Potri.015G134300 Populus trichocarpa HOM05D001263 ORTHO05D001120 1.3e-06 57.0 115 29.6
PGR031G2884 Punica granatum HOM05D001263 ORTHO05D001120 1.3e-06 57.0 132 28.0
Hund11544 Selenicereus undatus HOM05D001263 ORTHO05D001120 1.3e-06 57.0 124 33.1
Haze_08993 Corylus avellana HOM05D001263 ORTHO05D001120 1.7e-06 56.6 124 33.1
Thecc.03G165700 Theobroma cacao HOM05D001263 ORTHO05D001120 1.7e-06 56.6 125 31.2
Cc08_g13690 Coffea canephora HOM05D001263 ORTHO05D001120 2.2e-06 56.2 109 32.1
Gohir.A12G261900 Gossypium hirsutum HOM05D001263 ORTHO05D001120 2.9e-06 55.8 129 30.2
Sopen07g030480 Solanum pennellii HOM05D001263 ORTHO05D001120 2.9e-06 55.8 137 27.0
Ciclev10006628m.g Citrus clementina HOM05D001263 ORTHO05D001120 3.7e-06 55.5 109 30.3
Cc08_g13700 Coffea canephora HOM05D001263 ORTHO05D001120 3.7e-06 55.5 107 33.6
Migut.F00405 Erythranthe guttata HOM05D001263 ORTHO05D001120 3.7e-06 55.5 138 27.5
Gohir.A07G040100 Gossypium hirsutum HOM05D001263 ORTHO05D001120 3.7e-06 55.5 135 30.4
Gohir.D12G263366 Gossypium hirsutum HOM05D001263 ORTHO05D001120 3.7e-06 55.5 129 31.8
Phvul.004G124300 Phaseolus vulgaris HOM05D001263 ORTHO05D001120 3.7e-06 55.5 127 27.6
GSVIVG01018459001 Vitis vinifera HOM05D001263 ORTHO05D001120 3.7e-06 55.5 131 29.0
COL.COLO4_23806 Corchorus olitorius HOM05D001263 ORTHO05D001120 4.9e-06 55.1 139 29.5
Glyma.10G241300 Glycine max HOM05D001263 ORTHO05D001120 4.9e-06 55.1 120 30.0
Sabra12G0099300 Salix brachista HOM05D001263 ORTHO05D001120 4.9e-06 55.1 108 29.6
Duzib068G0562 Durio zibethinus HOM05D001263 ORTHO05D001120 6.4e-06 54.7 127 33.1
arahy.Tifrunner.gnm1.ann1.KV6JR1 Arachis hypogaea HOM05D001263 ORTHO05D001120 8.3e-06 54.3 135 29.6
Cc02_g03660 Coffea canephora HOM05D001263 ORTHO05D001120 8.3e-06 54.3 108 30.6
Gohir.D07G044200 Gossypium hirsutum HOM05D001263 ORTHO05D001120 8.3e-06 54.3 137 29.9
PGR102G2034 Punica granatum HOM05D001263 ORTHO05D001120 8.3e-06 54.3 133 24.8


User provided reference genes

Program Settings