Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 5.9e-108 394.4 230 100.0
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 1.0e-88 330.5 220 90.0
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 5.0e-75 285.0 224 74.6
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 4.7e-73 278.5 220 69.5
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 4.9e-54 215.3 169 67.5
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 6.4e-54 214.9 193 67.4
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 1.9e-53 213.4 166 69.3
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 2.4e-53 213.0 168 66.7
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 4.1e-53 212.2 204 58.8
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 1.2e-52 210.7 184 62.0
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 7.8e-52 208.0 177 63.3
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.1e-50 204.1 208 56.7
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 1.9e-50 203.4 200 60.0
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 2.5e-50 203.0 168 64.9
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 4.3e-50 202.2 168 65.5
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 5.6e-50 201.8 175 61.7
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 7.3e-50 201.4 187 60.4
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 7.3e-50 201.4 168 63.1
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 1.6e-49 200.3 178 61.8
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 1.6e-49 200.3 168 64.3
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 3.6e-49 199.1 173 63.6
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 4.7e-49 198.7 172 66.3
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 6.2e-49 198.4 208 54.8
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.1e-48 197.6 187 56.7
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.4e-48 197.2 182 70.9
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 4.0e-48 195.7 174 62.1
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 4.0e-48 195.7 167 74.3
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 8.9e-48 194.5 174 63.2
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 8.9e-48 194.5 175 61.7
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 8.9e-48 194.5 164 72.0
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 1.5e-47 193.7 164 63.4
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 2.0e-47 193.4 176 72.2
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 2.6e-47 193.0 170 62.4
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 2.6e-47 193.0 173 71.1
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 2.6e-47 193.0 168 67.9
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.4e-47 192.6 167 74.9
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 3.4e-47 192.6 164 60.4
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.4e-47 192.6 194 63.9
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 4.4e-47 192.2 172 61.6
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 4.4e-47 192.2 173 60.1
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 4.4e-47 192.2 197 61.4
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 5.8e-47 191.8 160 63.1
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 5.8e-47 191.8 164 65.2
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 7.5e-47 191.4 170 62.4
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 7.5e-47 191.4 175 61.7
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 7.5e-47 191.4 160 75.0
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 7.5e-47 191.4 164 62.8
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.7e-46 190.3 233 50.6
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 1.7e-46 190.3 195 56.4
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 3.7e-46 189.1 207 62.3
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 3.7e-46 189.1 207 62.3
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 4.9e-46 188.7 210 55.2
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 6.4e-46 188.3 169 62.1
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 6.4e-46 188.3 188 63.8
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 6.4e-46 188.3 163 63.2
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 1.1e-45 187.6 181 70.7
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 1.4e-45 187.2 178 65.2
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 1.4e-45 187.2 170 60.6
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 5.4e-45 185.3 223 50.2
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 7.0e-45 184.9 209 64.1
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 2.7e-44 183.0 193 51.8
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 4.6e-44 182.2 120 76.7
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 7.8e-44 181.4 214 62.6
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 1.0e-43 181.0 214 63.1
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.0e-43 181.0 214 63.1
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.3e-43 180.6 214 62.1
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 1.7e-43 180.3 115 79.1
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 2.3e-43 179.9 117 77.8
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 3.0e-43 179.5 110 81.8
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 3.9e-43 179.1 119 75.6
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 3.9e-43 179.1 164 71.3
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 5.1e-43 178.7 120 73.3
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 6.6e-43 178.3 112 80.4
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 6.6e-43 178.3 99 85.9
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 8.6e-43 177.9 216 57.9
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 1.5e-42 177.2 110 80.9
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 3.3e-42 176.0 117 75.2
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.3e-42 176.0 119 75.6
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 4.3e-42 175.6 103 84.5
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 9.5e-42 174.5 123 70.7
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 9.5e-42 174.5 198 51.5
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 9.5e-42 174.5 120 75.0
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 2.1e-41 173.3 120 72.5
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 2.1e-41 173.3 131 67.2
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 2.1e-41 173.3 121 73.6
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 2.8e-41 172.9 111 76.6
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 2.8e-41 172.9 118 74.6
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 2.8e-41 172.9 116 75.0
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 4.7e-41 172.2 112 77.7
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 4.7e-41 172.2 121 71.9
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 4.7e-41 172.2 112 76.8
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 6.2e-41 171.8 118 74.6
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 1.1e-40 171.0 120 70.0
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 1.4e-40 170.6 120 69.2
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 1.8e-40 170.2 113 76.1
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 4.0e-40 169.1 98 83.7
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 6.8e-40 168.3 121 71.9
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 8.9e-40 167.9 104 78.8
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 1.2e-39 167.5 120 72.5
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 1.5e-39 167.2 106 78.3
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 2.0e-39 166.8 184 52.2
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 2.0e-39 166.8 121 70.2
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 3.4e-39 166.0 121 71.9
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 4.4e-39 165.6 106 78.3
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 4.4e-39 165.6 201 48.8
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 5.8e-39 165.2 106 78.3
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 5.8e-39 165.2 106 78.3
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 7.5e-39 164.9 105 77.1
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 1.3e-38 164.1 114 72.8
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 1.3e-38 164.1 114 72.8
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 3.2e-37 159.5 121 67.8
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 1.6e-36 157.1 223 44.4
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 3.5e-36 156.0 201 54.7
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 3.5e-36 156.0 115 67.0
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 6.6e-35 151.8 85 82.4
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 2.5e-34 149.8 155 52.3
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 9.5e-34 147.9 117 65.8
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 4.7e-33 145.6 129 61.2
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 1.1e-32 144.4 99 71.7
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 3.1e-32 142.9 158 48.1
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.0e-31 140.2 128 57.8
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 2.6e-31 139.8 97 70.1
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 1.3e-30 137.5 95 71.6
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.7e-30 137.1 84 78.6
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 3.9e-27 125.9 83 74.7
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 4.3e-26 122.5 145 51.0
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 4.0e-24 115.9 65 81.5
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 1.4e-08 64.3 109 43.1
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 5.3e-08 62.4 42 66.7


User provided reference genes

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