Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.4e-125 453.0 240 100.0
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 6.3e-121 437.6 240 96.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 6.1e-116 421.0 242 93.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 4.1e-96 355.1 219 84.5
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 6.8e-91 337.8 242 74.4
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.4e-90 335.1 234 76.1
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 7.5e-90 334.3 244 74.2
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.2e-89 332.8 234 75.6
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.4e-88 330.1 243 74.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.4e-88 330.1 239 72.4
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.2e-88 328.9 240 73.3
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 5.4e-88 328.2 243 71.6
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 7.0e-88 327.8 230 74.8
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 72.8
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.6e-87 326.6 241 72.6
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 7.8e-87 324.3 243 71.6
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 7.8e-87 324.3 246 71.1
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.0e-86 323.9 245 71.0
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.3e-86 323.6 245 71.8
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.3e-86 323.6 245 71.8
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 2.3e-86 322.8 240 71.2
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 5.0e-86 321.6 241 71.8
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.0e-86 321.6 240 71.7
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.5e-85 320.1 242 70.7
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.9e-85 319.7 242 71.1
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.3e-85 318.5 241 71.4
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.3e-85 317.8 240 70.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.3e-85 317.8 240 70.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.2e-84 317.0 243 71.2
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.6e-84 316.6 245 69.4
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.6e-84 316.6 237 70.5
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.7e-84 315.1 240 69.6
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.2e-84 314.7 249 67.5
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 8.0e-84 314.3 245 69.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.0e-83 313.9 241 69.3
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.8e-83 313.2 230 73.0
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.1e-83 312.4 244 68.4
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.0e-83 312.0 234 73.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 4.0e-83 312.0 238 69.3
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.2e-82 310.5 241 71.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.6e-82 309.3 242 70.2
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.4e-82 308.9 221 73.3
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.4e-82 308.5 231 70.6
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 2.9e-81 305.8 238 69.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.9e-81 305.8 242 69.0
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.7e-81 305.4 238 68.9
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 6.4e-81 304.7 233 69.5
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 8.3e-81 304.3 240 67.9
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.1e-80 303.9 237 68.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.4e-80 303.5 240 67.9
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.4e-80 303.5 253 66.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.4e-80 303.5 243 67.1
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.9e-80 303.1 244 66.8
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 4.1e-80 302.0 245 66.5
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 7.0e-80 301.2 244 66.8
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 7.0e-80 301.2 242 65.3
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 7.0e-80 301.2 217 72.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 9.2e-80 300.8 245 66.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 2.0e-79 299.7 243 66.7
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 6.0e-79 298.1 244 66.4
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.0e-78 297.4 244 65.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.3e-78 297.0 240 66.2
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 2.3e-78 296.2 242 66.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 6.6e-78 294.7 224 69.2
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 8.6e-78 294.3 242 65.3
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.5e-77 293.5 242 66.1
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.5e-77 293.5 242 65.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 245 64.5
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 242 65.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.5e-77 292.7 204 75.0
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.3e-77 292.4 242 66.1
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.3e-77 292.4 242 65.7
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.3e-77 292.4 242 66.1
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.3e-77 292.4 242 66.1
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 3.3e-77 292.4 240 65.8
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.3e-77 292.4 247 63.6
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 4.3e-77 292.0 203 75.4
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 9.5e-77 290.8 212 69.3
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.6e-76 290.0 233 66.5
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 6.2e-76 288.1 241 66.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 6.2e-76 288.1 224 70.5
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 2.3e-75 286.2 232 62.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 3.1e-75 285.8 232 62.5
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 5.8e-74 281.6 241 65.1
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.7e-73 280.0 218 65.1
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 4.9e-73 278.5 254 61.0
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.1e-72 277.3 220 63.2
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 4.6e-71 271.9 242 62.8
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.1e-70 268.5 239 61.9
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-69 266.9 234 62.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.6e-68 262.3 232 62.1
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 9.9e-66 254.2 212 63.2
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 9.2e-64 247.7 211 60.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 6.0e-63 245.0 190 66.8
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.1e-61 240.7 246 56.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.8e-60 236.1 210 58.6
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 4.7e-60 235.3 214 58.9
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.7e-57 226.9 172 69.8
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 4.9e-57 225.3 206 55.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 8.1e-52 208.0 225 50.2
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 2.5e-45 186.4 240 50.4
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.2e-41 173.3 232 44.8
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 8.7e-38 161.4 175 54.3
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.6e-36 157.1 99 83.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.0e-34 150.2 121 66.9
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 5.1e-30 135.6 224 41.1
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.2e-28 130.2 118 63.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.2e-24 116.3 78 76.9
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 9.3e-24 114.8 209 37.8
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 6.7e-14 82.0 210 29.0
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-10 71.2 59 64.4
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.3e-09 67.8 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.7e-09 67.4 46 76.1


User provided reference genes

Program Settings