Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 1.2e-294 1015.8 503 100.0
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 3.7e-256 887.9 494 89.7
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 6.8e-242 840.5 491 86.6
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 2.4e-239 832.0 505 83.8
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 6.0e-182 641.3 506 65.6
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 6.2e-179 631.3 506 65.0
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 2.0e-177 626.3 506 64.8
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 3.8e-176 622.1 499 62.5
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.1e-175 620.5 499 63.3
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 5.5e-175 618.2 466 65.9
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 2.7e-174 615.9 506 61.5
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 7.9e-174 614.4 499 61.5
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 2.3e-173 612.8 461 66.4
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 1.9e-172 609.8 492 62.6
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 2.5e-172 609.4 499 62.3
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 2.5e-172 609.4 453 65.8
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 3.3e-172 609.0 509 63.5
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 9.6e-172 607.4 499 61.9
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 1.3e-171 607.1 438 67.1
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 9.0e-170 600.9 510 61.0
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.2e-169 600.5 504 59.5
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 3.4e-169 599.0 510 59.6
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 4.5e-169 598.6 482 60.2
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 4.9e-168 595.1 460 65.2
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 1.9e-167 593.2 478 61.3
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.9e-167 593.2 505 59.2
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 1.6e-166 590.1 474 61.8
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.0e-165 587.4 488 59.0
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 1.3e-165 587.0 504 60.9
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.3e-165 586.3 494 59.9
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 3.0e-165 585.9 509 58.0
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 6.7e-165 584.7 486 59.1
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 5.7e-164 581.6 500 61.4
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 9.7e-164 580.9 500 59.4
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 1.6e-163 580.1 484 59.3
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 3.7e-163 578.9 445 62.7
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 3.7e-163 578.9 409 66.7
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 6.3e-163 578.2 445 62.7
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 1.4e-162 577.0 507 58.0
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.8e-162 576.6 476 61.8
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 2.4e-162 576.2 488 59.4
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 5.3e-162 575.1 505 58.0
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.9e-162 574.7 476 61.8
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 9.0e-162 574.3 513 59.3
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 9.0e-162 574.3 495 58.2
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.2e-161 573.9 476 61.6
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.0e-161 573.2 476 61.3
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 2.6e-161 572.8 508 58.1
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 2.6e-161 572.8 508 58.1
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 3.4e-161 572.4 500 57.4
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 5.9e-161 571.6 508 57.7
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.0e-160 570.9 505 58.6
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 1.3e-160 570.5 508 57.5
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 1.7e-160 570.1 507 58.6
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 3.8e-160 568.9 511 58.7
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 6.5e-160 568.2 508 57.3
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 6.5e-160 568.2 498 57.0
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 1.4e-159 567.0 478 58.2
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 3.2e-159 565.8 437 63.8
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 4.2e-159 565.5 482 59.8
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 4.2e-159 565.5 486 56.2
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 5.5e-159 565.1 504 59.1
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 2.7e-158 562.8 485 57.7
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 4.6e-158 562.0 476 60.9
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 4.6e-158 562.0 492 59.1
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 6.1e-158 561.6 501 57.5
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 7.9e-158 561.2 492 58.9
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 3.0e-157 559.3 425 62.6
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 3.0e-157 559.3 495 58.4
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.5e-156 557.0 496 57.7
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 1.9e-156 556.6 491 57.6
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 1.3e-155 553.9 470 57.9
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 3.7e-155 552.4 554 53.1
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 8.2e-155 551.2 492 57.1
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 1.1e-154 550.8 486 58.0
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 2.9e-152 542.7 460 59.3
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 3.8e-152 542.3 439 62.2
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 6.5e-152 541.6 492 55.7
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.1e-151 540.8 481 59.5
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 6.7e-149 531.6 472 56.6
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 8.8e-149 531.2 506 55.3
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.1e-148 530.8 449 58.6
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 4.4e-148 528.9 449 58.6
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.7e-147 526.9 509 54.0
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 4.8e-147 525.4 406 62.8
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 1.4e-146 523.9 505 52.1
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 2.0e-145 520.0 487 53.2
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 1.7e-144 516.9 503 54.9
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 2.9e-144 516.2 489 54.2
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 2.9e-144 516.2 456 57.0
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 7.2e-143 511.5 521 52.0
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 4.4e-140 502.3 502 52.0
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 7.4e-140 501.5 508 51.0
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 1.3e-139 500.7 491 52.5
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 3.8e-136 489.2 403 58.3
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 1.1e-135 487.6 484 53.7
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.2e-135 485.7 374 64.4
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 7.2e-135 485.0 403 58.6
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 7.2e-135 485.0 471 54.1
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 1.6e-134 483.8 482 52.9
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 2.3e-133 479.9 465 53.5
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.2e-126 457.6 411 55.7
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 5.7e-124 448.7 361 59.8
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 9.8e-124 448.0 357 61.9
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 4.1e-122 442.6 357 59.9
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 2.6e-116 423.3 350 58.0
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 9.8e-116 421.4 346 60.7
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 2.6e-100 370.2 284 63.4
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 8.6e-96 355.1 527 40.2
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 1.3e-91 341.3 405 48.4
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 4.3e-87 326.2 428 41.8
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 6.8e-85 318.9 248 63.3
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 5.4e-82 309.3 334 55.4
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.5e-79 300.4 318 52.8
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 5.2e-77 292.7 250 61.6
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 4.6e-73 279.6 211 66.8
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 1.5e-68 264.6 425 39.1
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 4.5e-68 263.1 198 64.1
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 3.8e-67 260.0 528 31.8
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 3.8e-59 233.4 183 61.7
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.2e-46 191.0 170 56.5
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.2e-44 185.3 455 28.4
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 1.2e-41 175.3 167 56.3
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 4.3e-39 166.8 236 40.7
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 7.4e-39 166.0 198 46.5
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.5e-36 158.3 275 38.2
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.3e-30 138.7 113 62.8
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.2e-30 137.9 121 58.7
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 9.1e-29 132.5 116 57.8
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 5.5e-26 123.2 336 28.3
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 7.0e-21 106.3 78 60.3
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 1.7e-19 101.7 74 64.9
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 3.8e-19 100.5 106 47.2
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 6.3e-14 83.2 80 55.0
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 1.2e-12 79.0 54 72.2


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