Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.7e-282 974.5 455 100.0
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.1e-278 962.6 455 98.5
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 5.1e-273 943.7 459 95.4
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.1e-266 921.8 459 93.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.3e-255 885.9 458 87.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 6.3e-255 883.6 461 87.2
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.8e-254 882.1 458 87.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.0e-252 876.3 475 84.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-252 875.9 458 86.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.9e-252 874.8 459 86.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 5.0e-252 874.0 459 86.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 8.5e-252 873.2 458 86.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.9e-251 872.1 460 86.5
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.5e-251 871.7 459 85.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.5e-251 871.7 459 86.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.5e-251 871.7 459 86.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.2e-251 870.2 460 86.3
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 9.4e-251 869.8 459 85.8
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.2e-250 869.4 459 86.3
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 6.1e-250 867.1 459 86.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 6.1e-250 867.1 461 86.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 5.2e-249 864.0 459 85.8
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 6.7e-249 863.6 460 86.3
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.7e-249 863.6 459 85.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-248 862.8 461 85.5
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.5e-248 862.4 459 84.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.0e-248 862.1 460 85.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.6e-248 861.7 459 85.4
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 3.3e-248 861.3 459 85.4
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.3e-248 861.3 460 85.0
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.7e-247 859.0 461 85.2
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 4.8e-247 857.4 461 85.5
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.4e-246 855.9 460 84.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.7e-245 851.7 461 84.8
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-244 847.0 460 83.9
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-244 847.0 460 83.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 6.5e-244 847.0 459 85.0
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 81.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.5e-243 845.1 481 81.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 7.2e-243 843.6 459 84.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 9.4e-243 843.2 459 82.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.6e-242 842.4 459 82.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.6e-242 842.4 459 82.6
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.0e-241 839.7 460 83.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.4e-241 839.3 459 83.2
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.0e-240 835.5 459 82.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 5.7e-240 833.9 460 82.0
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 9.8e-240 833.2 459 83.0
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 81.3
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.9e-237 823.9 460 80.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.8e-236 821.2 460 80.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.5e-235 818.5 460 80.9
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.2e-235 817.8 459 80.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.2e-235 817.8 459 81.5
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.2e-234 816.2 461 80.9
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 80.4
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 80.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.6e-234 815.8 460 79.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 80.4
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.1e-234 815.5 461 81.1
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 80.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.0e-233 813.1 462 78.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.4e-233 812.8 458 79.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 9.8e-232 806.6 459 79.7
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 4.9e-231 804.3 455 81.1
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.4e-230 802.7 459 79.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.5e-229 797.7 458 78.6
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 5.9e-229 797.3 455 80.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.8e-228 794.7 486 75.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 5.0e-228 794.3 460 78.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 3.3e-227 791.6 455 78.9
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 9.5e-227 790.0 460 77.2
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 4.7e-226 787.7 460 78.9
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.3e-225 785.4 460 78.9
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.3e-225 785.4 497 74.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.5e-224 782.7 459 79.1
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.4e-222 775.4 459 76.3
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.2e-222 775.0 443 79.0
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.6e-216 755.4 458 72.9
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 5.8e-216 754.2 469 72.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 9.8e-216 753.4 459 74.9
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.4e-214 748.8 460 75.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 5.4e-206 721.1 496 67.7
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 4.4e-200 701.4 458 72.1
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.4e-199 697.6 459 70.6
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 7.6e-192 674.1 462 65.8
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-190 670.2 446 66.1
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.2e-190 668.3 446 66.4
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.1e-189 666.0 393 75.8
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.5e-187 659.8 456 64.9
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.4e-183 644.0 338 87.6
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 9.3e-182 640.6 337 88.4
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 9.3e-182 640.6 337 88.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 9.3e-182 640.6 338 87.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-181 639.8 337 86.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.0e-181 637.9 337 86.6
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-179 633.3 338 86.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 5.8e-176 621.3 469 59.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 4.3e-171 605.1 323 85.4
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.2e-167 592.8 338 80.5
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.5e-166 588.2 294 90.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 5.5e-166 588.2 337 78.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.0e-165 584.7 450 58.2
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.2e-162 576.2 337 79.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-148 530.0 301 81.1
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.8e-148 527.7 289 84.1
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 5.3e-145 518.5 337 73.6
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 9.1e-145 517.7 294 82.0
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.2e-142 508.8 291 78.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.4e-140 503.8 277 81.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 6.3e-138 495.0 338 65.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.1e-129 467.6 280 76.4
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 2.4e-105 386.7 449 41.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 9.2e-97 358.2 484 36.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.5e-72 276.6 160 75.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.4e-58 228.8 110 92.7
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.4e-58 228.8 110 92.7
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-57 227.6 110 91.8
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.8e-53 213.8 163 62.0
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.0e-38 164.5 100 79.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 4.1e-12 77.0 40 80.0


User provided reference genes

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