Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 5.0e-271 937.2 471 100.0
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.7e-170 603.2 400 80.5
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 8.2e-165 584.3 400 77.8
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 2.8e-157 559.3 400 74.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.7e-144 515.4 403 66.7
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 3.0e-143 512.7 399 66.4
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.6e-142 509.6 403 65.8
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 7.4e-142 508.1 399 66.4
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.2e-141 506.5 403 65.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 3.7e-141 505.8 399 66.7
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 6.3e-141 505.0 401 65.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 8.2e-141 504.6 401 65.6
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.8e-140 503.4 399 65.7
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 9.1e-140 501.1 401 65.1
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.6e-139 500.4 400 66.5
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.6e-139 500.4 401 64.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.0e-139 500.0 410 63.9
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 2.0e-139 500.0 401 65.1
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 2.6e-139 499.6 399 64.9
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 3.5e-139 499.2 401 64.8
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.0e-138 497.7 399 65.4
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.3e-138 497.3 399 64.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.2e-138 496.5 399 66.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.2e-138 496.5 399 66.4
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.1e-137 494.2 399 66.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.9e-137 493.4 401 63.8
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 2.5e-137 493.0 399 64.9
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.2e-137 492.7 399 65.7
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 4.2e-137 492.3 404 64.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 9.4e-137 491.1 399 64.2
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.2e-136 490.7 442 60.0
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.6e-136 490.3 400 66.0
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.7e-136 489.6 399 65.2
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.7e-136 489.6 368 69.6
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.7e-136 488.8 399 64.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 6.1e-136 488.4 399 63.9
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.8e-135 486.9 399 65.4
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.0e-135 485.7 406 64.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 6.7e-135 485.0 399 64.9
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.5e-134 483.8 406 64.3
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.6e-134 483.0 401 64.3
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.6e-134 483.0 399 64.7
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 7.5e-134 481.5 392 64.8
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.3e-133 480.7 399 63.9
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 3.7e-133 479.2 404 62.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.7e-133 479.2 402 63.2
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 6.3e-133 478.4 403 63.0
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.3e-132 475.3 392 64.5
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.7e-131 473.0 418 62.0
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 7.7e-131 471.5 392 64.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.3e-130 470.7 404 61.1
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.3e-130 470.7 403 62.5
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.9e-130 469.5 399 62.7
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.9e-129 466.8 403 62.0
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 7.2e-129 464.9 398 61.3
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 7.2e-129 464.9 404 60.9
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.2e-128 464.2 428 58.6
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.4e-127 460.7 459 56.4
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.0e-127 459.5 414 60.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.3e-125 454.1 403 60.5
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.1e-124 451.1 399 60.7
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.4e-124 450.7 439 57.6
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.8e-124 450.3 401 60.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 9.1e-124 448.0 400 61.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 1.0e-122 444.5 401 58.9
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.3e-122 443.4 430 55.6
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 3.8e-122 442.6 401 60.8
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.6e-122 441.8 404 61.1
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 7.2e-121 438.3 408 60.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 3.6e-120 436.0 399 58.4
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 1.2e-118 431.0 398 59.8
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.4e-118 429.5 344 66.6
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-115 420.2 398 57.3
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-115 420.2 398 57.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.9e-108 397.1 398 56.3
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 1.2e-104 384.4 268 72.8
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.2e-102 377.9 248 75.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 7.5e-102 375.2 249 75.1
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 6.2e-96 355.5 290 65.9
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.2e-94 351.3 430 46.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.0e-90 338.2 398 49.0
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.6e-83 314.3 203 77.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.5e-78 297.7 280 58.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.4e-76 291.2 190 74.7
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.5e-65 254.6 268 53.0
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 4.0e-63 246.5 248 53.2
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.0e-58 231.9 201 61.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 4.3e-57 226.5 161 72.7
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.4e-31 141.7 118 60.2
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 3.1e-31 140.6 139 56.1
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.1e-07 62.4 91 44.0


User provided reference genes

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