Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 0.0e+00 1530.8 805 100.0
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 0.0e+00 1395.9 805 91.9
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 0.0e+00 1385.9 805 91.6
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 0.0e+00 1268.4 803 84.7
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.1e-306 1055.4 804 71.0
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 7.9e-301 1036.9 862 66.9
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.9e-299 1032.3 804 69.3
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 3.2e-294 1015.0 802 68.8
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.1e-289 1000.0 822 65.2
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.1e-289 998.4 779 67.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.0e-287 993.4 822 65.2
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.7e-287 992.6 816 66.3
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.2e-286 988.4 797 66.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 5.5e-286 987.6 799 66.5
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 5.5e-286 987.6 768 67.8
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.6e-285 986.1 808 65.8
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.6e-285 986.1 798 65.7
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 6.9e-281 970.7 794 66.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.0e-280 969.1 810 65.1
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.3e-279 966.5 806 65.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.9e-279 965.3 784 66.2
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.1e-278 963.4 820 64.6
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 5.5e-278 961.1 802 65.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 3.6e-277 958.4 804 64.2
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 4.6e-277 958.0 801 65.7
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 8.8e-276 953.7 746 68.2
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.3e-274 947.6 770 66.8
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 3.1e-273 945.3 813 63.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.5e-267 926.4 783 64.0
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 2.8e-266 922.2 807 63.1
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.4e-265 919.8 716 68.3
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 2.6e-264 915.6 793 63.3
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 5.9e-264 914.4 815 61.7
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.0e-263 913.7 775 64.4
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.1e-262 910.2 764 64.3
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 9.4e-262 907.1 799 62.5
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.6e-261 906.4 818 60.9
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 2.7e-261 905.6 821 60.4
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.2e-259 900.2 793 61.0
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.8e-258 894.8 799 63.1
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.8e-255 885.2 802 60.8
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 3.6e-253 878.6 793 61.0
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 5.2e-252 874.8 821 60.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.2e-251 873.6 793 60.8
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.2e-250 869.4 820 58.9
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.8e-249 866.3 789 61.0
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.8e-249 866.3 781 61.7
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 7.0e-249 864.4 815 59.0
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 9.1e-249 864.0 798 60.2
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.7e-248 862.4 750 63.1
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.3e-247 860.1 782 60.2
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.2e-247 859.4 806 58.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.5e-246 856.7 785 60.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.2e-246 854.4 781 61.2
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.8e-245 852.4 752 61.6
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 3.0e-244 849.0 774 59.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 5.2e-244 848.2 781 60.4
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.2e-243 847.0 786 60.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.2e-243 847.0 757 61.4
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.3e-242 843.6 758 61.5
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.8e-242 842.4 787 58.8
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.8e-242 842.4 787 58.8
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 8.3e-242 840.9 751 59.5
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.1e-241 840.5 787 58.7
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.4e-241 839.3 758 61.2
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 3.1e-241 839.0 777 59.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 5.4e-241 838.2 787 61.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 3.5e-240 835.5 777 58.8
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.5e-240 835.1 796 59.0
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.5e-240 835.1 787 59.0
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 5.0e-239 831.6 751 62.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.2e-237 827.0 773 57.8
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 6.1e-237 824.7 802 57.7
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 2.8e-229 799.3 766 59.5
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.0e-228 797.3 813 55.8
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 9.8e-227 790.8 792 56.9
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.7e-226 790.0 850 55.8
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.4e-225 786.9 827 53.9
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 2.3e-223 779.6 802 57.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 5.0e-223 778.5 812 53.8
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 6.2e-221 771.5 635 66.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 6.8e-220 768.1 700 59.9
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 2.8e-205 719.5 719 55.5
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.4e-204 717.2 798 50.3
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.7e-202 710.3 801 50.9
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.3e-199 699.9 780 51.2
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 4.9e-194 682.2 517 69.1
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.6e-179 633.3 801 47.2
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.1e-177 625.2 465 70.5
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 4.6e-176 622.5 594 59.1
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 4.6e-176 622.5 604 57.9
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.8e-173 613.2 583 58.5
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 9.0e-172 608.2 501 65.1
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 4.5e-171 605.9 785 49.4
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.7e-168 596.7 702 51.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.8e-164 583.9 485 64.9
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.7e-157 559.7 629 52.6
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.7e-155 552.0 565 55.6
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.9e-151 539.7 491 59.5
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 4.1e-148 529.6 491 59.3
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.2e-128 464.9 836 36.8
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.8e-128 463.8 871 38.6
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.8e-103 381.3 773 35.7
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 9.2e-92 342.4 275 68.4
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 3.4e-86 323.9 365 47.9
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.8e-77 293.9 235 68.5
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-76 292.0 240 65.0
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.9e-76 291.6 616 33.0
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 3.3e-73 280.8 203 71.4
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.9e-68 265.0 812 29.8
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.9e-63 246.5 241 57.3
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.9e-63 246.5 238 54.6
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 8.7e-58 229.6 868 25.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 4.1e-23 114.4 118 54.2
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 5.3e-23 114.0 144 45.1
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 9.8e-17 93.2 164 40.9
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.1e-15 88.2 128 43.8
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.4e-15 87.4 102 50.0
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 2.0e-14 85.5 68 60.3
EL10Ac2g04870 Beta vulgaris HOM05D000215 ORTHO05D008904 7.8e-06 57.0 178 26.4
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 7.8e-06 57.0 47 59.6


User provided reference genes

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