Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005282.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.0e-28 129.4 67 100.0
ClCG01G006250 Citrullus lanatus HOM05D000896 ORTHO05D000594 2.1e-21 105.1 61 83.6
MELO3C005256.2 Cucumis melo HOM05D000896 ORTHO05D000594 2.3e-20 101.7 61 80.3
ClCG01G006230 Citrullus lanatus HOM05D000896 ORTHO05D000594 9.6e-19 96.3 61 75.4
CsaV3_5G028430 Cucumis sativus L. HOM05D000896 ORTHO05D000594 9.0e-17 89.7 65 69.2
CsaV3_5G027950 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.5e-16 89.0 58 74.1
CsaV3_5G027980 Cucumis sativus L. HOM05D000896 ORTHO05D000594 5.8e-16 87.0 58 74.1
MELO3C005306.2 Cucumis melo HOM05D000896 ORTHO05D000594 7.6e-16 86.7 58 72.4
Sed0016322 Sechium edule HOM05D000896 ORTHO05D000594 3.8e-15 84.3 59 72.9
ClCG08G015080 Citrullus lanatus HOM05D000896 ORTHO05D000594 4.9e-15 84.0 59 64.4
MELO3C005283.2 Cucumis melo HOM05D000896 ORTHO05D000594 4.9e-15 84.0 66 63.6
CsaV3_5G028440 Cucumis sativus L. HOM05D000896 ORTHO05D000594 2.7e-13 78.2 54 70.4
Sed0019902 Sechium edule HOM05D000896 ORTHO05D000594 3.5e-13 77.8 60 65.0
Sed0008121 Sechium edule HOM05D000896 ORTHO05D000594 1.0e-12 76.3 61 62.3
ClCG08G014520 Citrullus lanatus HOM05D000001 ORTHO05D009054 2.3e-12 75.1 59 59.3
CsaV3_2G028710 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.0e-12 74.7 58 58.6
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.0e-12 74.7 58 58.6
ClCG11G011860 Citrullus lanatus HOM05D000896 ORTHO05D000594 3.9e-12 74.3 59 57.6
MELO3C010986.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.5e-11 72.4 58 58.6
MELO3C010987.2 Cucumis melo HOM05D000896 ORTHO05D000594 3.3e-11 71.2 59 57.6
CsaV3_5G028220 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.3e-11 71.2 49 73.5
Sed0014459 Sechium edule HOM05D000896 ORTHO05D000594 3.3e-11 71.2 63 54.0
MELO3C010943.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.6e-10 68.9 65 52.3
ClCG08G015060 Citrullus lanatus HOM05D000896 ORTHO05D000594 5.8e-08 60.5 60 43.3
ClCG02G017000 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.7e-07 58.9 57 54.4
Haze_00193 Corylus avellana HOM05D000896 ORTHO05D000594 4.9e-07 57.4 58 48.3
Haze_00191 Corylus avellana HOM05D000896 ORTHO05D000594 6.5e-07 57.0 59 45.8
Sc07g0008350 Simmondsia chinensis HOM05D000896 ORTHO05D000594 8.4e-07 56.6 64 45.3
Cfa004783 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.1e-06 56.2 54 46.3
Cfa004768 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.4e-06 55.8 54 46.3
Cfa004785 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.4e-06 55.8 54 44.4
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.4e-06 55.8 59 44.1
Cfa004784 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.9e-06 55.5 54 44.4
Eucgr.I00811 Eucalyptus grandis HOM05D000896 ORTHO05D000594 1.9e-06 55.5 60 41.7
DCAR_025815 Daucus carota HOM05D000896 ORTHO05D000594 3.2e-06 54.7 63 39.7
Sabra15G0011700 Salix brachista HOM05D000896 ORTHO05D000594 3.2e-06 54.7 62 41.9
Cfa004786 Carpinus fangiana HOM05D000896 ORTHO05D000594 4.2e-06 54.3 54 44.4
QL09p018688 Quercus lobata HOM05D000896 ORTHO05D000594 4.2e-06 54.3 63 46.0
Cfa004780 Carpinus fangiana HOM05D000896 ORTHO05D000594 7.1e-06 53.5 54 44.4
AL4G41370 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 9.3e-06 53.1 62 41.9
Cfa004778 Carpinus fangiana HOM05D000896 ORTHO05D000594 9.3e-06 53.1 54 44.4
COL.COLO4_02946 Corchorus olitorius HOM05D000896 ORTHO05D000594 9.3e-06 53.1 59 44.1
Manes.14G006500 Manihot esculenta HOM05D000896 ORTHO05D000594 9.3e-06 53.1 57 43.9


User provided reference genes

Program Settings