Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 3.7e-146 521.5 266 100.0
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.9e-135 485.3 267 93.3
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 2.1e-133 479.2 267 93.3
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 3.8e-127 458.4 267 86.5
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 3.3e-94 349.0 238 72.7
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.6e-93 346.7 273 65.6
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 6.2e-93 344.7 256 68.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 6.2e-93 344.7 269 69.1
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.8e-92 343.2 273 65.6
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.3e-90 337.0 274 66.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 1.1e-89 334.0 270 66.7
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 1.1e-89 334.0 270 66.7
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.9e-89 333.2 269 64.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 9.2e-89 330.9 273 63.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.0e-88 329.7 271 63.1
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.7e-87 326.6 272 62.9
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 6.6e-87 324.7 273 61.5
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.1e-86 323.9 259 65.3
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.5e-86 322.8 272 62.9
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.2e-85 320.5 273 63.0
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.2e-85 320.5 273 63.7
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.6e-85 320.1 273 63.4
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.1e-85 319.7 253 67.2
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 3.6e-85 318.9 273 62.6
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 4.7e-85 318.5 271 62.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 4.7e-85 318.5 272 62.1
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.3e-84 316.2 239 65.3
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.0e-83 313.2 253 64.0
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 3.4e-83 312.4 271 59.8
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.7e-82 310.1 271 59.0
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.9e-82 309.3 271 59.0
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 2.9e-82 309.3 238 65.1
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.1e-81 307.4 275 60.7
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.4e-81 307.0 238 66.0
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 7.1e-81 304.7 238 65.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.2e-80 303.9 238 64.3
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.2e-80 303.9 238 65.1
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.2e-80 303.9 271 59.4
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 2.1e-80 303.1 237 64.6
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.7e-80 302.8 232 66.4
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 3.5e-80 302.4 271 57.2
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 4.6e-80 302.0 238 63.9
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 7.8e-80 301.2 238 64.3
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.0e-79 300.8 237 63.7
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.3e-79 300.4 238 63.4
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.3e-79 299.7 253 60.9
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 9.5e-78 294.3 269 60.6
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.2e-77 293.9 272 58.5
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 2.1e-77 293.1 277 57.8
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 2.8e-77 292.7 275 57.1
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 3.6e-77 292.4 234 63.2
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 6.2e-77 291.6 275 57.1
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.1e-76 290.8 277 57.0
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 3.1e-76 289.3 271 57.2
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 4.0e-76 288.9 272 58.1
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 4.0e-76 288.9 272 58.1
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 6.8e-76 288.1 273 57.5
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 1.2e-75 287.3 237 60.3
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.2e-75 287.3 238 63.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.5e-75 287.0 233 62.7
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 2.0e-75 286.6 235 63.0
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 4.4e-75 285.4 268 58.6
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.3e-74 283.9 232 63.8
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 3.8e-74 282.3 235 63.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 4.9e-74 282.0 268 58.6
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 6.4e-74 281.6 279 55.2
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 6.4e-74 281.6 279 55.2
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-73 280.0 277 55.2
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-73 280.0 277 55.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 5.4e-73 278.5 238 60.5
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.2e-72 277.3 232 62.5
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 6.0e-72 275.0 266 55.6
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.7e-71 273.5 232 59.9
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 6.6e-71 271.6 268 57.1
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 8.6e-71 271.2 234 59.8
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.9e-70 270.0 230 61.3
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 4.3e-70 268.9 276 55.1
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 5.6e-70 268.5 234 60.7
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 5.6e-70 268.5 219 63.5
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 5.6e-70 268.5 237 61.6
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 9.3e-65 251.1 206 63.1
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 3.0e-63 246.1 202 62.9
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.9e-62 243.4 278 51.4
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.6e-61 240.4 273 51.3
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.1e-61 240.0 237 55.7
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 3.1e-60 236.1 263 51.0
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.6e-59 233.0 243 55.6
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.3e-58 230.7 255 49.8
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 8.4e-58 228.0 234 54.3
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 8.4e-58 228.0 234 54.3
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 3.5e-56 222.6 237 49.4
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 7.9e-56 221.5 237 50.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.1e-54 217.6 245 51.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.3e-53 214.2 235 48.5
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 4.8e-53 212.2 239 53.1
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.1e-52 209.5 238 48.3
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 5.8e-51 205.3 248 51.6
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.7e-50 203.8 239 51.0
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 3.8e-50 202.6 238 47.1
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 3.8e-50 202.6 238 50.4
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.1e-48 196.8 161 62.1
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 2.1e-48 196.8 244 47.1
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 5.3e-44 182.2 239 45.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 6.9e-44 181.8 238 45.0
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 9.3e-41 171.4 199 49.7
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-40 170.6 199 49.2
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 5.7e-38 162.2 246 41.1
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 6.7e-31 138.7 233 39.9
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 3.3e-30 136.3 225 39.6
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.3e-29 134.4 91 70.3
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 4.1e-28 129.4 221 40.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.0e-26 124.8 244 35.7
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.2e-26 123.6 224 38.4
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 9.4e-25 118.2 120 50.8
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 7.4e-22 108.6 105 55.2
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 9.7e-22 108.2 106 55.7
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.8e-20 104.0 108 45.4
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.5e-17 92.4 110 49.1
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 6.5e-10 68.9 48 60.4
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 8.5e-10 68.6 179 30.2


User provided reference genes

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