Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.3e-105 385.6 195 100.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.8e-100 368.2 194 94.8
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.7e-95 351.7 194 90.2
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 6.5e-76 287.7 197 78.2
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 9.2e-62 240.7 199 66.8
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 5.9e-61 238.0 169 74.6
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 7.8e-61 237.7 213 63.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.7e-60 236.5 138 84.8
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 3.0e-60 235.7 207 65.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 6.6e-60 234.6 215 65.1
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 4.3e-59 231.9 140 82.9
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.6e-59 231.5 153 76.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 5.6e-59 231.5 174 69.0
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 7.3e-59 231.1 181 68.5
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 7.3e-59 231.1 209 64.1
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.6e-58 229.9 166 73.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 3.6e-58 228.8 222 59.5
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 6.2e-58 228.0 140 83.6
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 6.2e-58 228.0 140 83.6
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 6.2e-58 228.0 204 66.2
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.4e-57 226.9 206 64.1
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.8e-57 226.5 174 67.8
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 3.1e-57 225.7 139 82.7
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 5.2e-57 224.9 141 80.1
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.2e-57 224.9 139 79.9
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.2e-57 224.9 139 79.9
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.2e-57 224.9 139 79.9
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 6.8e-57 224.6 139 79.1
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 6.8e-57 224.6 205 63.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 8.9e-57 224.2 136 84.6
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 8.9e-57 224.2 163 73.0
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 8.9e-57 224.2 201 67.2
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 8.9e-57 224.2 146 78.8
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 8.9e-57 224.2 163 72.4
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.2e-56 223.8 140 80.0
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 1.2e-56 223.8 152 76.3
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.0e-56 223.0 163 72.4
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 2.6e-56 222.6 147 77.6
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 2.6e-56 222.6 206 61.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.6e-56 222.6 209 65.6
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 7.5e-56 221.1 213 61.5
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.8e-56 220.7 211 60.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.8e-56 220.7 212 61.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 1.3e-55 220.3 140 80.7
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.7e-55 219.9 208 60.1
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.7e-55 219.9 140 77.1
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.2e-55 219.5 132 81.8
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.2e-55 219.5 139 81.3
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.7e-55 218.8 138 80.4
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.9e-55 218.4 140 80.0
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 4.9e-55 218.4 155 73.5
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.4e-55 218.0 208 61.1
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 8.3e-55 217.6 140 79.3
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 8.3e-55 217.6 202 60.4
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.1e-54 217.2 127 85.8
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.1e-54 217.2 208 62.0
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.1e-54 217.2 201 61.7
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 1.4e-54 216.9 140 79.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-54 216.9 127 86.6
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.9e-54 216.5 185 64.9
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.9e-54 216.5 153 73.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.4e-54 216.1 143 78.3
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.4e-54 216.1 190 65.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 2.4e-54 216.1 201 62.2
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.4e-54 216.1 151 76.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 3.2e-54 215.7 136 81.6
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 3.2e-54 215.7 205 62.9
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 3.2e-54 215.7 140 80.0
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.2e-54 215.7 190 64.2
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 3.2e-54 215.7 129 83.7
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 3.2e-54 215.7 136 80.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 4.1e-54 215.3 165 70.3
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 4.1e-54 215.3 191 63.9
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 5.4e-54 214.9 141 77.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 5.4e-54 214.9 201 61.7
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.6e-53 213.4 154 76.0
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.0e-53 213.0 204 62.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 2.0e-53 213.0 125 84.8
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.0e-53 213.0 169 69.8
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.7e-53 212.6 140 78.6
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 2.7e-53 212.6 140 78.6
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.7e-53 212.6 140 77.1
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.5e-53 212.2 211 61.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 3.5e-53 212.2 208 62.0
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.5e-53 212.2 186 62.9
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 6.0e-53 211.5 142 78.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 6.0e-53 211.5 127 85.0
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.3e-52 210.3 204 61.8
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.3e-52 210.3 204 61.8
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.3e-52 210.3 136 80.9
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 3.0e-52 209.1 127 83.5
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 6.6e-52 208.0 206 61.2
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 8.6e-52 207.6 131 80.9
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 2.5e-51 206.1 203 60.1
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 7.3e-51 204.5 130 77.7
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 9.5e-51 204.1 206 58.7
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.2e-50 203.8 129 81.4
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.2e-50 203.8 135 80.7
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.8e-50 202.6 124 79.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 8.1e-50 201.1 125 77.6
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.8e-49 199.9 136 77.9
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.6e-48 196.1 124 80.6
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.9e-47 191.8 146 69.2
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.1e-43 180.6 135 71.1
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.9e-43 179.9 171 59.1
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.9e-43 179.9 132 73.5
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 3.3e-43 179.1 133 68.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 2.0e-40 169.9 128 66.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 3.8e-39 165.6 130 64.6
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 6.2e-34 148.3 157 52.2
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.5e-32 143.7 128 60.2
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.9e-28 129.0 118 62.7
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.1e-27 127.5 141 48.2
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.1e-25 119.4 106 63.2
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 6.9e-25 118.2 136 47.8
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 4.5e-24 115.5 92 66.3
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.1e-17 94.4 71 67.6
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.1e-17 94.4 47 91.5
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 4.0e-17 92.4 128 40.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-14 84.3 93 55.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.2e-13 80.9 47 76.6
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.6e-13 80.5 45 82.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 6.9e-09 65.1 65 56.9


User provided reference genes

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