Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 3.5e-112 409.8 589 100.0
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 3.6e-85 320.1 195 83.6
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 2.0e-80 304.3 549 94.4
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 6.1e-77 292.7 192 78.1
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 1.1e-57 228.8 200 61.0
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 4.1e-57 226.9 193 60.1
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 9.2e-57 225.7 193 59.6
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 2.7e-56 224.2 201 60.2
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 8.9e-52 209.1 198 56.6
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 1.5e-51 208.4 177 60.5
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 7.6e-51 206.1 177 59.9
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 1.1e-49 202.2 175 58.9
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 5.1e-47 193.4 172 57.0
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 1.4e-41 175.3 171 52.6
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.4e-41 175.3 178 52.2
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 2.4e-41 174.5 179 52.0
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 4.2e-41 173.7 152 61.2
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 1.0e-39 169.1 187 46.5
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 2.5e-38 164.5 151 54.3
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 3.3e-38 164.1 193 47.2
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 5.6e-38 163.3 198 49.5
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 6.9e-36 156.4 153 52.9
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 1.2e-35 155.6 148 52.7
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 2.0e-35 154.8 139 58.3
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 3.4e-35 154.1 151 52.3
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 5.8e-35 153.3 161 52.2
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 1.3e-34 152.1 158 51.3
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 8.4e-34 149.4 162 49.4
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 1.4e-33 148.7 147 49.0
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 3.5e-32 144.1 177 45.8
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 6.0e-32 143.3 170 45.3
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 2.3e-31 141.4 161 48.4
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 4.3e-30 137.1 151 47.7
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 5.3e-28 130.2 136 50.0
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 9.0e-28 129.4 157 42.0
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 2.0e-27 128.3 136 47.8
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 2.0e-27 128.3 136 47.8
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 2.0e-27 128.3 155 48.4
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 3.4e-27 127.5 97 63.9
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 4.5e-27 127.1 134 50.7
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 4.5e-27 127.1 137 48.9
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 5.8e-27 126.7 117 51.3
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 5.8e-27 126.7 136 47.8
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 5.8e-27 126.7 145 45.5
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 1.0e-26 125.9 137 48.2
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 1.7e-26 125.2 138 47.8
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 2.9e-26 124.4 124 50.0
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 2.9e-26 124.4 137 48.9
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 2.9e-26 124.4 114 53.5
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 4.9e-26 123.6 136 47.1
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 6.5e-26 123.2 114 52.6
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 1.1e-25 122.5 129 48.1
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.1e-25 122.5 111 53.2
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 1.9e-25 121.7 124 51.6
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 3.2e-25 120.9 111 53.2
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 1.2e-24 119.0 112 52.7
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 1.6e-24 118.6 156 47.4
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 2.1e-24 118.2 110 49.1
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 2.1e-24 118.2 110 50.0
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 2.7e-24 117.9 110 49.1
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 2.7e-24 117.9 157 42.7
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 1.3e-23 115.5 110 48.2
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 4.3e-22 110.5 162 43.2
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 4.3e-22 110.5 162 43.2
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 5.7e-22 110.2 114 45.6
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 7.4e-22 109.8 151 42.4
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 9.6e-22 109.4 114 46.5
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 1.6e-21 108.6 128 45.3
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 8.2e-21 106.3 159 40.9
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.1e-20 105.9 155 41.9
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 1.1e-20 105.9 161 39.8
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 5.3e-20 103.6 116 48.3
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 5.3e-20 103.6 153 39.9
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 1.5e-19 102.1 139 38.8
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 2.0e-19 101.7 119 44.5
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 2.0e-19 101.7 124 45.2
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 2.6e-19 101.3 155 40.6
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 2.6e-19 101.3 110 44.5
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 3.4e-19 100.9 111 44.1
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 3.4e-19 100.9 153 39.2
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 4.5e-19 100.5 113 46.0
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 2.9e-18 97.8 115 44.3
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 5.0e-18 97.1 132 40.2
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 5.0e-18 97.1 112 42.9
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 6.5e-18 96.7 114 47.4
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 1.9e-17 95.1 79 54.4
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 1.9e-17 95.1 105 44.8
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 2.5e-17 94.7 115 43.5
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 2.5e-17 94.7 112 42.9
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 5.5e-17 93.6 110 45.5
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 5.5e-17 93.6 154 35.7
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 5.5e-17 93.6 113 42.5
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 1.2e-16 92.4 105 45.7
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 1.6e-16 92.0 112 42.0
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.7e-16 91.3 141 40.4
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 2.7e-16 91.3 127 40.9
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 4.6e-16 90.5 114 43.0
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 4.6e-16 90.5 114 43.0
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 3.0e-15 87.8 113 41.6
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 3.0e-15 87.8 113 41.6
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 5.1e-15 87.0 111 43.2
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 6.7e-15 86.7 148 39.2
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 9.7e-14 82.8 145 38.6
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 1.6e-13 82.0 146 39.0
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 2.2e-13 81.6 111 38.7
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 2.2e-13 81.6 106 41.5
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 3.7e-13 80.9 148 38.5
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 3.7e-13 80.9 111 42.3
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 5.3e-12 77.0 110 40.9
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 1.2e-11 75.9 87 41.4
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 4.5e-11 73.9 66 54.5
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 1.0e-10 72.8 145 36.6
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 1.4e-09 68.9 87 41.4
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 2.3e-07 61.6 83 42.2
SEGI_12554 Sequoiadendron giganteum HOM05D006080 ORTHO05D007382 6.7e-07 60.1 151 29.1


User provided reference genes

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